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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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MTFMT
mitochondrial methionyl-tRNA formyltransferase
Chromosome 15 Β· 15q22.31
NCBI Gene: 123263Ensembl: ENSG00000103707.11HGNC: HGNC:29666UniProt: Q96DP5
27PubMed Papers
22Diseases
0Drugs
32Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
methionyl-tRNA formyltransferase activityconversion of methionyl-tRNA to N-formyl-methionyl-tRNAmitochondrioncatalytic activitycombined oxidative phosphorylation defect type 15mitochondrial complex I deficiency, nuclear type 27Leigh syndromeneurodegenerative disease
✦AI Summary

MTFMT (mitochondrial methionyl-tRNA formyltransferase) catalyzes the formylation of methionyl-tRNA to N-formylmethionyl-tRNA, a critical step for mitochondrial translation initiation 1. While N-formylation is not absolutely required for mitochondrial protein synthesis initiation, it is essential for efficient synthesis of mtDNA-encoded polypeptides and for proper assembly and stability of oxidative phosphorylation (OXPHOS) complexes I and IV 2. MTFMT deficiency impairs mitochondrial integrity and reduces basal NF-ΞΊB activity, increasing host susceptibility to intracellular infection 3. Pathogenic MTFMT mutations cause Combined Oxidative Phosphorylation Deficiency 15 and Mitochondrial Complex I Deficiency, Nuclear Type 27, typically presenting as Leigh syndrome or mitochondrial leukoencephalopathy 45. Clinical presentations include developmental delay, motor symptoms, basal ganglia changes, and white matter abnormalities, with symptom onset typically around 14 months 5. The c.626C>T mutation is among the most frequent disease alleles 4. Notably, patients with MTFMT mutations exhibit a milder clinical phenotype compared to Leigh syndrome caused by other nuclear defects, with 74% surviving into adulthood 5. Fibroblast analysis showing reduced complex I and IV subunits can establish causality of novel variants without requiring muscle biopsy 51.

Sources cited
1
MTFMT formylates Met-tRNA(Met) to generate N-formylmethionine-tRNA(Met) for translation initiation; mutations cause Leigh syndrome with severe defects in mitochondrial translation
PMID: 21907147
2
N-formylation is not absolute requirement for mitochondrial protein synthesis but is critical for efficient synthesis of mtDNA-coded polypeptides and OXPHOS complex I and IV stability and assembly
PMID: 30087118
3
MTFMT deficiency causes reduced mitochondrial integrity and activity, lowered basal NF-ΞΊB activity, and enhanced susceptibility to intracellular infection
PMID: 32636430
4
MTFMT mutations identified in patients with Leigh encephalopathy and white matter disease; c.626C>T is one of most frequent disease alleles; mutations cause loss-of-function with reduced complex I and IV subunits
PMID: 24461907
5
MTFMT mutations cause Leigh syndrome with median age of presentation 14 months; 38 patients identified with milder phenotype compared to other nuclear defects; 74% survival into adulthood; characteristic MRI findings include basal ganglia changes, white matter abnormalities, and brainstem lesions
PMID: 30911575
Disease Associationsβ“˜22
combined oxidative phosphorylation defect type 15Open Targets
0.83Strong
mitochondrial complex I deficiency, nuclear type 27Open Targets
0.78Strong
Leigh syndromeOpen Targets
0.51Moderate
neurodegenerative diseaseOpen Targets
0.51Moderate
genetic disorderOpen Targets
0.47Moderate
Abnormal facial shapeOpen Targets
0.34Weak
Cytochrome C oxidase-negative muscle fibersOpen Targets
0.34Weak
Decreased activity of mitochondrial complex IOpen Targets
0.34Weak
Inability to walk by childhood/adolescenceOpen Targets
0.34Weak
mitochondrial oxidative phosphorylation disorderOpen Targets
0.34Weak
Poor speechOpen Targets
0.34Weak
Short statureOpen Targets
0.34Weak
Waardenburg syndrome, IIa 2FOpen Targets
0.27Weak
neuroinflammatory disorderOpen Targets
0.24Weak
microcephalyOpen Targets
0.14Weak
neoplasmOpen Targets
0.08Suggestive
infectionOpen Targets
0.05Suggestive
lipodystrophy, congenital generalized, type 5Open Targets
0.04Suggestive
lipodystrophy, familial partial, type 8Open Targets
0.04Suggestive
diabetes mellitusOpen Targets
0.04Suggestive
Combined oxidative phosphorylation deficiency 15UniProt
Mitochondrial complex I deficiency, nuclear type 27UniProt
Pathogenic Variants32
NM_139242.4(MTFMT):c.994C>T (p.Arg332Ter)Pathogenic
Mitochondrial complex I deficiency, nuclear type 27|Combined oxidative phosphorylation defect type 15|not provided|Inborn genetic diseases|MTFMT-Related Disorders|MTFMT-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 332
NM_139242.4(MTFMT):c.626C>T (p.Ser209Leu)Pathogenic
Combined oxidative phosphorylation defect type 15|Leigh syndrome|6 conditions|not provided|Mitochondrial complex I deficiency, nuclear type 27|See cases|Inborn genetic diseases|Mitochondrial complex I deficiency, nuclear type 27;Combined oxidative phosphorylation defect type 15|MTFMT-Related Disorders|MTFMT-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 209
NM_139242.4(MTFMT):c.27G>A (p.Trp9Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 9
NM_139242.4(MTFMT):c.722-2A>GLikely pathogenic
not provided|Combined oxidative phosphorylation defect type 15
β˜…β˜…β˜†β˜†2024
NM_139242.4(MTFMT):c.1116del (p.Pro373fs)Likely pathogenic
Combined oxidative phosphorylation defect type 15
β˜…β˜…β˜†β˜†2024β†’ Residue 373
NM_139242.4(MTFMT):c.146_153del (p.Arg49fs)Pathogenic
Combined oxidative phosphorylation defect type 15|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 49
NM_139242.4(MTFMT):c.382C>T (p.Arg128Ter)Pathogenic
Combined oxidative phosphorylation defect type 15|Combined oxidative phosphorylation defect type 15;Mitochondrial complex I deficiency, nuclear type 27|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 128
NM_139242.4(MTFMT):c.219_222del (p.Glu74fs)Pathogenic
Combined oxidative phosphorylation defect type 15|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 74
NM_139242.4(MTFMT):c.374C>T (p.Ser125Leu)Pathogenic
Combined oxidative phosphorylation defect type 15
β˜…β˜…β˜†β˜†2022β†’ Residue 125
NM_139242.4(MTFMT):c.1100_1101del (p.Phe367fs)Pathogenic
Mitochondrial oxidative phosphorylation disorder|not provided
β˜…β˜…β˜†β˜†2021β†’ Residue 367
NM_139242.4(MTFMT):c.910C>T (p.Gln304Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2026β†’ Residue 304
NM_139242.4(MTFMT):c.310C>T (p.Gln104Ter)Likely pathogenic
Combined oxidative phosphorylation defect type 15
β˜…β˜†β˜†β˜†2025β†’ Residue 104
NM_139242.4(MTFMT):c.419+1G>CLikely pathogenic
Combined oxidative phosphorylation defect type 15
β˜…β˜†β˜†β˜†2025
NM_139242.4(MTFMT):c.834G>A (p.Trp278Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 278
NM_139242.4(MTFMT):c.1022del (p.Thr341fs)Likely pathogenic
Waardenburg syndrome, IIa 2F
β˜…β˜†β˜†β˜†2024β†’ Residue 341
NM_139242.4(MTFMT):c.1A>T (p.Met1Leu)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 1
NM_139242.4(MTFMT):c.881C>G (p.Ser294Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 294
NM_139242.4(MTFMT):c.719dup (p.Tyr240Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 240
NM_139242.4(MTFMT):c.834_835delinsAT (p.Trp278_Met279delinsTer)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 278
NM_139242.4(MTFMT):c.73C>T (p.Gln25Ter)Pathogenic
Combined oxidative phosphorylation defect type 15|not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 25
View on ClinVar β†—
Related Genes
EIF1AYShared pathway100%EIF1ADShared pathway100%EIF4E3Shared pathway100%EIF4E1BShared pathway100%MTHFD2Protein interaction98%MTHFD2LProtein interaction98%
Tissue Expression6 tissues
Heart
100%
Liver
87%
Ovary
86%
Lung
63%
Brain
51%
Bone Marrow
22%
Gene Interaction Network
Click a node to explore
MTFMTEIF1AYEIF1ADEIF4E3EIF4E1BMTHFD2MTHFD2L
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q96DP5
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.30LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.98 [0.74–1.30]
RankingsWhere MTFMT stands among ~20K protein-coding genes
  • #12,607of 20,598
    Most Researched27
  • #1,766of 5,498
    Most Pathogenic Variants32
  • #13,724of 17,882
    Most Constrained (LOEUF)1.30
Genes detectedMTFMT
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
New perspective in diagnostics of mitochondrial disorders: two years' experience with whole-exome sequencing at a national paediatric centre.
PMID: 27290639
J Transl Med Β· 2016
1.00
2
Phenotypic spectrum of eleven patients and five novel MTFMT mutations identified by exome sequencing and candidate gene screening.
PMID: 24461907
Mol Genet Metab Β· 2014
0.90
3
MTFMT deficiency correlates with reduced mitochondrial integrity and enhanced host susceptibility to intracellular infection.
PMID: 32636430
Sci Rep Β· 2020
0.80
4
Mitochondrial methionyl
PMID: 30087118
J Biol Chem Β· 2018
0.70
5
Leigh syndrome caused by mutations in
PMID: 30911575
Ann Clin Transl Neurol Β· 2019
0.60