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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NANOG
Nanog homeobox
Chromosome 12 · 12p13.31
NCBI Gene: 79923Ensembl: ENSG00000111704.12HGNC: HGNC:20857UniProt: A8K4D1
342PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Highly StudiedTrending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
somatic stem cell population maintenanceregulation of cell differentiationpositive regulation of stem cell proliferationnucleusneurodegenerative diseaseneoplasmoral squamous cell carcinomahepatocellular carcinoma
✦AI Summary

NANOG is a core transcription factor essential for maintaining pluripotency and self-renewal in embryonic stem cells. It functions as part of a regulatory network with OCT4 and SOX2, where these factors co-occupy target genes and form autoregulatory and feedforward loops to sustain stem cell identity 1. NANOG binds to its own promoter and can autoregulate its expression during differentiation 1. The protein operates through phase separation mechanisms, particularly with TAZ, to enhance transcription of pluripotency genes like SOX2 and OCT4 2. During normal development, NANOG expression is crucial for preimplantation development and progressively decreases as embryonic stem cells differentiate, becoming undetectable in most adult tissues 3. However, NANOG re-expression occurs in cancer, where it enables cancer cells to acquire stem-cell-like properties associated with tumor growth, metastasis, and treatment resistance 3. In adult endothelium, low-level NANOG expression maintains endothelial cell homeostasis by regulating telomerase and eNOS expression 4. Clinically, high NANOG expression in cancers correlates with poor prognosis, advanced stage, and treatment resistance, making it a promising prognostic biomarker 5. Two newly discovered enhancers regulate NANOG expression and are critical for balancing self-renewal and differentiation in human embryonic stem cells 6.

Sources cited
1
NANOG forms regulatory circuitry with OCT4 and SOX2, co-occupying target genes and creating autoregulatory loops
PMID: 16153702
2
NANOG functions through phase separation with TAZ to promote transcription of pluripotency genes
PMID: 36646707
3
NANOG expression decreases during development, is undetectable in adult tissues, but re-emerges in cancer to confer stem-cell properties
PMID: 32041418
4
Low-level NANOG expression maintains adult endothelial cell homeostasis by regulating telomerase and eNOS
PMID: 32640900
5
High NANOG expression in cancer correlates with poor prognosis and treatment resistance
PMID: 29602014
6
Two NANOG enhancers are essential for balancing self-renewal and differentiation in human embryonic stem cells
PMID: 40446796
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.46Moderate
neoplasmOpen Targets
0.12Weak
oral squamous cell carcinomaOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.11Weak
head and neck squamous cell carcinomaOpen Targets
0.11Weak
cancerOpen Targets
0.11Weak
hidradenitisOpen Targets
0.10Weak
posterior cortical atrophyOpen Targets
0.10Weak
ovarian cancerOpen Targets
0.10Weak
acute myeloid leukemiaOpen Targets
0.10Suggestive
gliomaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
esophageal squamous cell carcinomaOpen Targets
0.09Suggestive
triple-negative breast cancerOpen Targets
0.09Suggestive
squamous cell carcinomaOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
atrial fibrillationOpen Targets
0.08Suggestive
sarcomaOpen Targets
0.08Suggestive
skin basal cell carcinomaOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NR0B1Protein interaction100%SALL1Protein interaction100%TBX3Protein interaction100%NSD2Protein interaction100%UTF1Protein interaction100%FOXP1Protein interaction100%
Tissue Expression6 tissues
Brain
100%
Ovary
52%
Liver
49%
Lung
34%
Bone Marrow
12%
Heart
0%
Gene Interaction Network
Click a node to explore
NANOGNR0B1SALL1TBX3NSD2UTF1FOXP1
PROTEIN STRUCTURE
Preparing viewer…
PDB4RBO · 3.30 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.40Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.13 [0.05–0.40]
RankingsWhere NANOG stands among ~20K protein-coding genes
  • #936of 20,598
    Most Researched342 · top 5%
  • #2,006of 17,882
    Most Constrained (LOEUF)0.40 · top quartile
Genes detectedNANOG
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
Core transcriptional regulatory circuitry in human embryonic stem cells.
PMID: 16153702
Cell · 2005
1.00
2
Niche stiffness sustains cancer stemness via TAZ and NANOG phase separation.
PMID: 36646707
Nat Commun · 2023
0.90
3
NANOG expression in human development and cancerogenesis.
PMID: 32041418
Exp Biol Med (Maywood) · 2020
0.80
4
TGFbeta and SMADs talk to NANOG in human embryonic stem cells.
PMID: 18682233
Cell Stem Cell · 2008
0.72
5
Claudin-6 increases SNAI1, NANOG and SOX2 gene expression in human gastric adenocarcinoma AGS cells.
PMID: 36169897
Mol Biol Rep · 2022
0.70