HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NDRG3
NDRG family member 3
Chromosome 20 · 20q11.23
NCBI Gene: 57446Ensembl: ENSG00000101079.21HGNC: HGNC:14462UniProt: Q5TH30
52PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
extracellular exosomecytoplasmsignal transductionnegative regulation of cell growthneurodegenerative diseaseskin cancerskin neoplasmhair color
✦AI Summary

NDRG3 (NDRG family member 3) is a multifunctional protein that serves as a key mediator of cellular responses to metabolic stress, particularly hypoxia and lactate signaling. The protein adopts an α/β-hydrolase fold but lacks catalytic activity due to substitution of canonical catalytic triad residues 1. Under normoxic conditions, NDRG3 is degraded through a PHD2/VHL-dependent pathway, but hypoxia-induced lactate accumulation protects NDRG3 from degradation by direct lactate binding 2. Stabilized NDRG3 activates the Raf-ERK pathway by binding c-Raf, promoting angiogenesis and cell growth 2. The protein plays critical roles in neuronal differentiation, where lactate treatment enhances NDRG3 expression and promotes neurite extension through both NDRG3-dependent and independent mechanisms involving transcription factors TEAD1 and ELF4 3. NDRG3 also functions as a scaffolding protein that facilitates KRAS deubiquitination by promoting interaction between KRAS and USP9X deubiquitinase, thereby maintaining KRAS protein levels in KRAS-driven cancers 4. Clinically, NDRG3 shows tissue-specific expression patterns, being highly expressed in testis, prostate, and ovary 5, and serves as a tumor promoter in prostate cancer while functioning as a protective factor in thyroid cancer 67.

Sources cited
1
NDRG3 is degraded via PHD2/VHL in normoxia but stabilized by lactate binding in hypoxia, leading to Raf-ERK activation
PMID: 25892225
2
NDRG3 adopts α/β-hydrolase fold but lacks catalytic activity due to substituted catalytic residues
PMID: 31935861
3
NDRG3 promotes neuronal differentiation through lactate signaling involving TEAD1 and ELF4 transcription factors
PMID: 37172727
4
NDRG3 acts as scaffold facilitating KRAS-USP9X interaction for KRAS deubiquitination in cancer
PMID: 39819877
5
NDRG3 is highly expressed in testis, prostate, and ovary tissues
PMID: 11406283
6
NDRG3 functions as tumor promoter in prostate cancer, enhancing growth and migration
PMID: 18975380
7
NDRG3 serves as protective factor and diagnostic marker in papillary thyroid carcinoma
PMID: 36619553
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.48Moderate
skin cancerOpen Targets
0.36Weak
skin neoplasmOpen Targets
0.34Weak
hair colorOpen Targets
0.29Weak
nephrotic syndromeOpen Targets
0.28Weak
squamous cell carcinomaOpen Targets
0.28Weak
actinic keratosisOpen Targets
0.27Weak
cutaneous melanomaOpen Targets
0.27Weak
skin diseaseOpen Targets
0.27Weak
lysosomal storage diseaseOpen Targets
0.17Weak
neoplasmOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
azoospermiaOpen Targets
0.08Suggestive
prostate cancerOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
papillary thyroid carcinomaOpen Targets
0.07Suggestive
partial chromosome Y deletionOpen Targets
0.07Suggestive
spermatogenic failure 25Open Targets
0.06Suggestive
neural tube defects, folate-sensitiveOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
STK38LProtein interaction92%MYCNProtein interaction80%SOHLH1Shared pathway50%SOHLH2Shared pathway50%FOXA3Shared pathway33%SPMIP7Shared pathway25%
Tissue Expression6 tissues
Brain
100%
Heart
41%
Ovary
26%
Lung
16%
Bone Marrow
15%
Liver
8%
Gene Interaction Network
Click a node to explore
NDRG3STK38LMYCNSOHLH1SOHLH2FOXA3SPMIP7
PROTEIN STRUCTURE
Preparing viewer…
PDB6L4B · 2.20 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.66LoF Tolerant
pLIⓘ
0.17Tolerant
Observed/Expected LoF0.43 [0.28–0.66]
RankingsWhere NDRG3 stands among ~20K protein-coding genes
  • #8,588of 20,598
    Most Researched52
  • #4,825of 17,882
    Most Constrained (LOEUF)0.66
Genes detectedNDRG3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A lactate-induced response to hypoxia.
PMID: 25892225
Cell · 2015
1.00
2
Structural and Biophysical Analyses of Human N-Myc Downstream-Regulated Gene 3 (NDRG3) Protein.
PMID: 31935861
Biomolecules · 2020
0.90
3
Lactate promotes neuronal differentiation of SH-SY5Y cells by lactate-responsive gene sets through NDRG3-dependent and -independent manners.
PMID: 37172727
J Biol Chem · 2023
0.80
4
Anti-proteolytic regulation of KRAS by USP9X/NDRG3 in KRAS-driven cancer development.
PMID: 39819877
Nat Commun · 2025
0.70
5
Cloning and expression pattern of the human NDRG3 gene.
PMID: 11406283
Biochim Biophys Acta · 2001
0.60