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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NFYB
nuclear transcription factor Y subunit beta
Chromosome 12 · 12q23.3
NCBI Gene: 4801Ensembl: ENSG00000120837.8HGNC: HGNC:7805UniProt: F8VSL3
92PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transcription cis-regulatory region bindingRNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription activator activity, RNA polymerase II-specificregulation of transcription by RNA polymerase IIneurodegenerative diseaseatrial fibrillationgastric cancerglioblastoma multiforme
✦AI Summary

NFYB (nuclear transcription factor Y subunit beta) is a component of the heterotrimeric NF-Y transcription factor complex that recognizes CCAAT-box motifs in gene promoters 1. It functions as a sequence-specific DNA-binding transcription regulator that can act as both an activator and repressor depending on cofactor interactions 1. Mechanistically, NFYB regulates transcription through several pathways. In glioblastoma, NFYB activates HDAC5 to inhibit SHMT2 expression, reducing glycolysis and chemoresistance 1. In colorectal cancer, NFYB transactivates E2F1, which subsequently induces CHK1 expression to promote oxaliplatin resistance 2. NFYB also collaborates with other transcription factors like B-Myb to regulate cell cycle genes and enhancers 3. Additionally, NFYB activates PROS1 transcription in fibroblasts to promote papillary thyroid microcarcinoma progression through MERTK/WNT/TGF-β signaling 4. Clinically, elevated NFYB expression is associated with worse outcomes across multiple cancers. High NFYB predicts poor survival in gastric cancer patients, correlating with advanced T stage and cancer-associated fibroblast infiltration 5. In glioblastoma, NFYB knockdown inhibits proliferation, invasion, and migration, with expression linked to oxidative phosphorylation pathway activity and recurrence 6. NFYB also shows potential diagnostic value in recurrent pregnancy loss assessment 7.

Sources cited
1
NFYB recognizes CCAAT-box motifs and activates HDAC5 to inhibit SHMT2, reducing glycolysis and TMZ resistance in glioblastoma
PMID: 37742129
2
NFYB transactivates E2F1, which induces CHK1 expression to promote oxaliplatin resistance in colorectal cancer
PMID: 29203250
3
NFYB collaborates with B-Myb and other transcription factors to regulate cell cycle genes and bind enhancers/super-enhancers
PMID: 39309447
4
NFYB activates PROS1 transcription in fibroblasts to promote papillary thyroid microcarcinoma progression through MERTK signaling
PMID: 40433916
5
High NFYB expression predicts worse survival in gastric cancer and correlates with cancer-associated fibroblast infiltration
PMID: 36152055
6
NFYB knockdown inhibits glioblastoma proliferation, invasion, and migration; NFYB is associated with oxidative phosphorylation and recurrence
PMID: 38510250
7
NFYB shows diagnostic value in recurrent pregnancy loss assessment with >80% accuracy in machine learning analysis
PMID: 39923360
8
NFYB coding sequence shows 87-95% conservation across mammalian species; excluded as candidate for congenital splay leg in piglets
PMID: 17901702
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.54Moderate
atrial fibrillationOpen Targets
0.20Weak
gastric cancerOpen Targets
0.07Suggestive
glioblastoma multiformeOpen Targets
0.06Suggestive
cervical carcinomaOpen Targets
0.05Suggestive
cancerOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
colorectal carcinomaOpen Targets
0.03Suggestive
sarcomaOpen Targets
0.03Suggestive
acute myeloid leukemiaOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.03Suggestive
Ehlers-Danlos syndrome, musculocontractural typeOpen Targets
0.02Suggestive
bone remodeling diseaseOpen Targets
0.02Suggestive
malariaOpen Targets
0.02Suggestive
diffuse large B-cell lymphomaOpen Targets
0.02Suggestive
age-related macular degenerationOpen Targets
0.02Suggestive
hereditary diffuse gastric adenocarcinomaOpen Targets
0.02Suggestive
systemic lupus erythematosusOpen Targets
0.02Suggestive
Huntington diseaseOpen Targets
0.02Suggestive
lymphomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TP53Protein interaction100%SP1Protein interaction99%DRAP1Protein interaction99%REPIN1Protein interaction98%MYCProtein interaction95%CIITAProtein interaction95%
Tissue Expression6 tissues
Heart
100%
Brain
87%
Bone Marrow
78%
Lung
63%
Liver
63%
Ovary
59%
Gene Interaction Network
Click a node to explore
NFYBTP53SP1DRAP1REPIN1MYCCIITA
PROTEIN STRUCTURE
Preparing viewer…
PDB8QU4 · 1.38 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.88LoF Tolerant
pLIⓘ
0.14Tolerant
Observed/Expected LoF0.47 [0.26–0.88]
RankingsWhere NFYB stands among ~20K protein-coding genes
  • #5,203of 20,598
    Most Researched92
  • #7,772of 17,882
    Most Constrained (LOEUF)0.88
Genes detectedNFYB
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
NFYB increases chemosensitivity in glioblastoma by promoting HDAC5-mediated transcriptional inhibition of SHMT2.
PMID: 37742129
J Neuropathol Exp Neurol · 2023
1.00
2
Exclusion of NFYB as candidate gene for congenital splay leg in piglets and radiation hybrid mapping of further five homologous porcine genes from human chromosome 12 (HSA12).
PMID: 17901702
Cytogenet Genome Res · 2007
0.90
3
Over-expression of NFYB affects stromal cells reprogramming and predicts worse survival in gastric cancer patients.
PMID: 36152055
Aging (Albany NY) · 2022
0.80
4
PROS1-MERTK Axis Drives Tumor Microenvironment Crosstalk and Progression in Papillary Thyroid Microcarcinoma.
PMID: 40433916
Adv Sci (Weinh) · 2025
0.70
5
Unraveling the intricacies of glioblastoma progression and recurrence: insights into the role of NFYB and oxidative phosphorylation at the single-cell level.
PMID: 38510250
Front Immunol · 2024
0.60