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4 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NHLRC3
NHL repeat containing 3
Chromosome 13 · 13q13.3
NCBI Gene: 387921Ensembl: ENSG00000188811.14HGNC: HGNC:33751UniProt: Q5JS37
10PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ubiquitin protein ligase activityprotein polyubiquitinationproteasome-mediated ubiquitin-dependent protein catabolic processextracellular regionmusculoskeletal system diseaseadolescent idiopathic scoliosistooth diseasepolycystic ovary syndrome
✦AI Summary

NHLRC3 (NHL repeat containing 3) is an E3 ubiquitin ligase involved in proteasome-mediated protein degradation through polyubiquitination, with broader roles in immune regulation and disease susceptibility. Functionally, NHLRC3 contains NHL repeat domains and possesses ubiquitin protein ligase activity, localizing to azurophil granules and extracellular regions, suggesting involvement in neutrophil biology and immune responses [GO Annotations]. Recent evidence demonstrates NHLRC3's clinical significance in multiple contexts: it was identified as part of a seven-gene prognostic model for gastric adenocarcinoma, where elevated expression associated with immune cell infiltration and worse treatment outcomes 1. In lentiviral vector engineering, NHLRC3 knockout enhanced viral production approximately 6.53-fold in combination with other gene knockouts, indicating its role in restricting viral packaging 2. NHLRC3 emerged as a candidate gene in genetic predisposition to brucellosis in goats, linking it to immune response regulation against bacterial infections 3. In rectal cancer, NHLRC3 protein levels predicted unfavorable neoadjuvant chemoradiotherapy response 4. These findings suggest NHLRC3 functions in immune surveillance, potentially through regulating protein degradation pathways critical for immune cell function and pathogen recognition.

Sources cited
1
NHLRC3 is part of a seven-gene prognostic model for gastric adenocarcinoma where elevated expression associates with immune cell infiltration and worse prognosis
PMID: 40294351
2
NHLRC3 knockout increases lentiviral vector production, demonstrating its role in restricting viral packaging when knocked out
PMID: 39387256
3
NHLRC3 is a candidate gene associated with genetic predisposition to brucellosis in goats, involved in immune response regulation
PMID: 37973848
4
NHLRC3 protein levels predict unfavorable response to neoadjuvant chemoradiotherapy in rectal cancer patients
PMID: 37895091
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
musculoskeletal system diseaseOpen Targets
0.27Weak
adolescent idiopathic scoliosisOpen Targets
0.23Weak
tooth diseaseOpen Targets
0.22Weak
polycystic ovary syndromeOpen Targets
0.21Weak
bile duct disorderOpen Targets
0.12Weak
preeclampsiaOpen Targets
0.11Weak
muscle crampOpen Targets
0.11Weak
Uterine leiomyomaOpen Targets
0.06Suggestive
uterine fibroidOpen Targets
0.06Suggestive
Abnormal pupillary functionOpen Targets
0.04Suggestive
gram-negative bacterial infectionsOpen Targets
0.04Suggestive
insomniaOpen Targets
0.03Suggestive
atrioventricular blockOpen Targets
0.03Suggestive
sialolithiasisOpen Targets
0.03Suggestive
liver diseaseOpen Targets
0.03Suggestive
ovarian neoplasmOpen Targets
0.02Suggestive
AlkalosisOpen Targets
0.02Suggestive
ovarian dysfunctionOpen Targets
0.02Suggestive
Abruptio PlacentaeOpen Targets
0.02Suggestive
knee fractureOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RMND5AShared pathway100%SPOPShared pathway67%FBXO28Shared pathway67%TRIM2Shared pathway67%KLHL42Shared pathway67%MARCHF8Shared pathway67%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
96%
Liver
93%
Heart
73%
Lung
65%
Brain
41%
Gene Interaction Network
Click a node to explore
NHLRC3RMND5ASPOPFBXO28TRIM2KLHL42MARCHF8
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q5JS37
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.15LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.64 [0.37–1.15]
RankingsWhere NHLRC3 stands among ~20K protein-coding genes
  • #17,115of 20,598
    Most Researched10
  • #12,039of 17,882
    Most Constrained (LOEUF)1.15
Genes detectedNHLRC3
Sources retrieved4 papers
Response time—
📄 Sources
4
1
Identification and Validation of Gastric Adenocarcinoma Prognosis Features Based on Neutrophil-Related Genes.
PMID: 40294351
JCO Precis Oncol · 2025
1.00
2
Engineering of HEK293T Cell Factory for Lentiviral Production by High-Throughput Selected Genes.
PMID: 39387256
CRISPR J · 2024
0.75
3
New insights into the genetic predisposition of brucellosis and its effect on the gut and vaginal microbiota in goats.
PMID: 37973848
Sci Rep · 2023
0.50
4
Data-Independent Acquisition Mass Spectrometry Analysis of FFPE Rectal Cancer Samples Offers In-Depth Proteomics Characterization of the Response to Neoadjuvant Chemoradiotherapy.
PMID: 37895091
Int J Mol Sci · 2023
0.25