HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NKRF
NFKB repressing factor
Chromosome X · Xq24
NCBI Gene: 55922Ensembl: ENSG00000186416.18HGNC: HGNC:19374UniProt: A0AAG2UWQ9
176PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of transcription by RNA polymerase IInucleusnucleolusRNA polymerase II cis-regulatory region sequence-specific DNA binding
✦AI Summary

NKRF (NF-κB repressing factor) is a multifunctional nuclear protein that primarily functions as a transcriptional repressor of NF-κB signaling pathways 12. The protein enhances DHX15 ATPase activity by stabilizing its functional conformation and is involved in constitutive silencing of interferon beta and iNOS promoters [UniProt summary from PubMed:12381793]. NKRF contains an XRN2 binding domain that enables direct interaction with the 5'-3' exonuclease XRN2, facilitating precursor ribosomal RNA processing and controlling XRN2's spatial distribution in the nucleolus 3. Mechanistically, NKRF inhibits NF-κB activity through multiple pathways, including binding to negative regulatory elements in target gene promoters and interacting with factors like HuR to decrease mRNA stability of inflammatory genes such as MMP2 and MMP9 1. Disease relevance is significant, as NKRF downregulation contributes to pathological cardiac remodeling post-myocardial infarction 1, while its interaction with nuclear G-actin helps repress epithelial-mesenchymal transition 4. NKRF also modulates Alzheimer's disease and atherosclerosis progression through NF-κB pathway regulation 5. Clinically, NKRF represents a potential therapeutic target for cardiac remodeling, cancer chemoresistance, and inflammatory diseases, with its dysfunction linked to poor prognosis in various pathological conditions.

Sources cited
1
NKRF functions as transcriptional repressor protecting against cardiac remodeling by inhibiting HuR transcription
PMID: 37667861
2
NKRF competitively interacts with GCLM to regulate NF-κB activity in chemoresistance
PMID: 39747101
3
NKRF contains XRN2 binding domain and regulates pre-rRNA processing in nucleolus
PMID: 32011671
4
NKRF binds nuclear G-actin and represses epithelial-mesenchymal transition
PMID: 37566765
5
NKRF regulates NF-κB signaling in Alzheimer's disease and atherosclerosis progression
PMID: 38738952
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RELAProtein interaction99%DHX15Protein interaction98%XRN2Protein interaction98%DCAF11Protein interaction94%POU2F3Protein interaction72%STAU1Protein interaction71%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
NKRFRELADHX15XRN2DCAF11POU2F3STAU1
PROTEIN STRUCTURE
Preparing viewer…
PDB6SH6 · 1.85 Å · X-ray
View on RCSB ↗
RankingsWhere NKRF stands among ~20K protein-coding genes
  • #2,483of 20,598
    Most Researched176 · top quartile
Genes detectedNKRF
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Pathogenicity and virulence of Japanese encephalitis virus: Neuroinflammation and neuronal cell damage.
PMID: 33724154
Virulence · 2021
1.00
2
NKRF in Cardiac Fibroblasts Protects against Cardiac Remodeling Post-Myocardial Infarction via Human Antigen R.
PMID: 37667861
Adv Sci (Weinh) · 2023
0.90
3
Nucleus-translocated GCLM promotes chemoresistance in colorectal cancer through a moonlighting function.
PMID: 39747101
Nat Commun · 2025
0.80
4
Meta-analysis and transcriptomic analysis reveal that NKRF and ZBTB17 regulate the NF-κB signaling pathway, contributing to the shared molecular mechanisms of Alzheimer's disease and atherosclerosis.
PMID: 38738952
CNS Neurosci Ther · 2024
0.70
5
Genome-Wide Identification of Microglia-Related RNA-Binding Proteins and Regulated Alternative Splicing in Spinal Cord Injury.
PMID: 40893312
ACS Omega · 2025
0.68