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GeneE
26 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NOTCH2
notch receptor 2
Chromosome 1 Β· 1p12
NCBI Gene: 4853Ensembl: ENSG00000134250.22HGNC: HGNC:7882UniProt: Q04721
385PubMed Papers
22Diseases
1Drugs
99Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedReceptorTranscription Factor
RESEARCH IMPACT
Highly StudiedTrendingVariant-Rich
CLINICAL
Clinical TrialsOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
regulation of osteoclast developmentprotein bindingpulmonary valve morphogenesisNotch signaling pathwayacroosteolysis dominant typeAlagille syndrome due to a NOTCH2 point mutationAlagille syndromediffuse large B-cell lymphoma
✦AI Summary

NOTCH2 is a transmembrane receptor that regulates cell fate determination through ligand-induced signaling. Upon activation by membrane-bound ligands JAG1, JAG2, or DLL1, NOTCH2 releases its intracellular domain (NICD), which forms a transcriptional complex with RBPJ to activate enhancer of split genes 12. The receptor controls differentiation, proliferation, and apoptosis programs and is critical for bone remodeling through enhanced osteoclast differentiation via NFATc1 3. NOTCH2 mutations cause Alagille syndrome, an autosomal dominant multisystem disorder characterized by dysfunctional Notch signaling; NOTCH2 variants account for a subset of cases, with missense mutations predominating 45. In immune development, NOTCH2 is essential for splenic marginal zone B cell development, dendritic cell differentiation, and helper T cell divergence 6. Human-specific NOTCH2NL paralogs expand cortical neurogenesis by promoting radial glia progenitor maintenance through enhanced Notch pathway activation, potentially contributing to human brain evolution 78. Clinically, NOTCH2 dysregulation drives cancer progression: elevated NOTCH2 translation promotes breast cancer metastasis via the YTHDF3 axis 9, while the DLL4-NOTCH2 pathway mediates anti-PD-1 resistance in bladder cancer 10. Loss-of-function NOTCH2 mutations promote ovarian cancer cell proliferation and invasion through reduced apoptosis and increased NF-ΞΊB signaling 11.

Sources cited
1
NOTCH2 ligand activation releases NICD which forms transcriptional complex with RBPJ
PMID: 21378985
2
NICD-RBPJ complex activates enhancer of split locus genes
PMID: 21378989
3
NOTCH2 enhances NFATc1 and positively regulates osteoclast differentiation
PMID: 29149593
4
NOTCH2 mutations cause Alagille syndrome, a multisystem autosomal dominant disorder
PMID: 30266153
5
NOTCH2 variants predominantly missense and associated with Alagille syndrome pathogenesis
PMID: 31343788
6
NOTCH2 required for splenic marginal zone B cell development and dendritic cell differentiation
PMID: 22695918
7
Human-specific NOTCH2NL promotes cortical progenitor maintenance and neuronal output
PMID: 29856955
8
NOTCH2NL enhances Notch signaling in radial glia and regulates cortical neurogenesis
PMID: 29856954
9
YTHDF3-mediated NOTCH2 translation promotes breast cancer EMT and metastasis
PMID: 39924078
10
DLL4-NOTCH2 axis promotes anti-PD-1 resistance through M2 macrophage polarization in bladder cancer
PMID: 38462037
11
NOTCH2 P2113S mutation impairs ovarian cancer progression through reduced apoptosis and NF-ΞΊB pathway alterations
PMID: 37728427
Disease Associationsβ“˜22
acroosteolysis dominant typeOpen Targets
0.83Strong
Alagille syndrome due to a NOTCH2 point mutationOpen Targets
0.78Strong
Alagille syndromeOpen Targets
0.68Moderate
diffuse large B-cell lymphomaOpen Targets
0.55Moderate
diabetes mellitusOpen Targets
0.48Moderate
type 2 diabetes mellitusOpen Targets
0.46Moderate
keratoacanthomaOpen Targets
0.42Moderate
cutaneous squamous cell carcinomaOpen Targets
0.41Moderate
prostate adenocarcinomaOpen Targets
0.41Moderate
dermatophytosisOpen Targets
0.38Weak
gastric carcinomaOpen Targets
0.37Weak
skin basal cell carcinomaOpen Targets
0.37Weak
melanomaOpen Targets
0.37Weak
lung carcinomaOpen Targets
0.37Weak
marginal zone B-cell lymphomaOpen Targets
0.37Weak
lymphomaOpen Targets
0.37Weak
squamous cell carcinomaOpen Targets
0.37Weak
skin squamous cell carcinomaOpen Targets
0.37Weak
Merkel cell skin cancerOpen Targets
0.37Weak
skeletal dysplasiaOpen Targets
0.37Weak
Alagille syndrome 2UniProt
Hajdu-Cheney syndromeUniProt
Pathogenic Variants99
NM_024408.4(NOTCH2):c.5983_5984del (p.Leu1995fs)Pathogenic
not provided|NOTCH2-related disorder|Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 1995
NM_024408.4(NOTCH2):c.6909del (p.Ile2304fs)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 2304
NM_024408.4(NOTCH2):c.6007C>T (p.Arg2003Ter)Pathogenic
not provided|Hajdu-Cheney syndrome|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 2003
NM_024408.4(NOTCH2):c.6909dup (p.Ile2304fs)Pathogenic
Monoclonal B-Cell Lymphocytosis|Hajdu-Cheney syndrome|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 2304
NM_024408.4(NOTCH2):c.4756del (p.Glu1586fs)Likely pathogenic
Alagille syndrome due to a NOTCH2 point mutation
β˜…β˜…β˜†β˜†2024β†’ Residue 1586
NM_024408.4(NOTCH2):c.6403_6404del (p.Leu2135fs)Pathogenic
Hajdu-Cheney syndrome|NOTCH2-related disorder|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 2135
NM_024408.4(NOTCH2):c.6450del (p.Val2151fs)Likely pathogenic
See cases|Alagille syndrome due to a NOTCH2 point mutation;Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2024β†’ Residue 2151
NM_024408.4(NOTCH2):c.7198C>T (p.Arg2400Ter)Pathogenic
Hajdu-Cheney syndrome|not provided|Neoplasm|Alagille syndrome due to a NOTCH2 point mutation
β˜…β˜…β˜†β˜†2023β†’ Residue 2400
NM_024408.4(NOTCH2):c.6787C>T (p.Gln2263Ter)Pathogenic
not provided|Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2023β†’ Residue 2263
NM_024408.4(NOTCH2):c.6667C>T (p.Gln2223Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2022β†’ Residue 2223
NM_024408.4(NOTCH2):c.5664dup (p.Arg1889fs)Pathogenic
not provided|Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2022β†’ Residue 1889
NM_024408.4(NOTCH2):c.6853C>T (p.Gln2285Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜…β˜†β˜†2018β†’ Residue 2285
NM_024408.4(NOTCH2):c.6650_6651del (p.Val2217fs)Likely pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 2217
NM_024408.4(NOTCH2):c.7030G>T (p.Glu2344Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 2344
NM_024408.4(NOTCH2):c.1668C>A (p.Cys556Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 556
NM_024408.4(NOTCH2):c.6028-5T>ALikely pathogenic
Alagille syndrome due to a NOTCH2 point mutation
β˜…β˜†β˜†β˜†2025
NM_024408.4(NOTCH2):c.5098del (p.Ala1700fs)Likely pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 1700
NM_024408.4(NOTCH2):c.6759G>A (p.Trp2253Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 2253
NM_024408.4(NOTCH2):c.1495C>T (p.Gln499Ter)Pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025β†’ Residue 499
NM_024408.4(NOTCH2):c.5002+1G>ALikely pathogenic
Hajdu-Cheney syndrome
β˜…β˜†β˜†β˜†2025
View on ClinVar β†—
Drug Targets1
TAREXTUMABPhase II
Neurogenic locus notch homolog protein 2 inhibitor
pancreatic neoplasm
Related Genes
ADAM10Protein interaction100%JAG2Protein interaction100%LFNGProtein interaction100%DLL3Protein interaction100%MFNGProtein interaction98%GSK3BProtein interaction98%
Tissue Expression6 tissues
Lung
100%
Ovary
100%
Liver
62%
Bone Marrow
55%
Heart
51%
Brain
49%
Gene Interaction Network
Click a node to explore
NOTCH2ADAM10JAG2LFNGDLL3MFNGGSK3B
PROTEIN STRUCTURE
Preparing viewer…
PDB5MWB Β· 1.86 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.15Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.11 [0.08–0.15]
RankingsWhere NOTCH2 stands among ~20K protein-coding genes
  • #776of 20,598
    Most Researched385 Β· top 5%
  • #781of 5,498
    Most Pathogenic Variants99 Β· top quartile
  • #212of 17,882
    Most Constrained (LOEUF)0.15 Β· top 5%
Genes detectedNOTCH2
Sources retrieved26 papers
Response timeβ€”
πŸ“„ Sources
26β–Ό
1
Alagille Syndrome.
PMID: 30266153
Clin Liver Dis Β· 2018
1.00
2
Human-Specific NOTCH2NL Genes Expand Cortical Neurogenesis through Delta/Notch Regulation.
PMID: 29856955
Cell Β· 2018
0.90
3
Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis.
PMID: 29856954
Cell Β· 2018
0.80
4
Splenic marginal zone lymphoma.
PMID: 28288718
Best Pract Res Clin Haematol Β· 2017
0.76
5
Neutrophil extracellular traps promote immune escape in hepatocellular carcinoma by up-regulating CD73 through Notch2.
PMID: 38969159
Cancer Lett Β· 2024
0.72