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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NPM3
nucleophosmin/nucleoplasmin 3
Chromosome 10 · 10q24.32
NCBI Gene: 10360Ensembl: ENSG00000107833.12HGNC: HGNC:7931UniProt: O75607
99PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingRNA bindingchromatin remodelingnucleoplasmmathematical abilitylung adenocarcinomaneoplasmcancer
✦AI Summary

NPM3 (nucleophosmin/nucleoplasmin 3) is a nuclear chaperone protein that regulates diverse cellular processes including ribosome biogenesis, chr10 remodeling, and protein chaperoning 1. The protein is primarily localized to the nucleus and is widely expressed across human tissues, with particularly high expression in pancreas and testis 1. NPM3 functions through homo- and hetero-oligomer formation with other NPM family members, particularly NPM1, to mediate chr10 assembly and nucleosome formation 2. The protein modulates NPM1's histone chaperone function and RNA-binding activity, with NPM3 suppressing NPM1's RNA-binding capability while enhancing its nucleoplasm-nucleolus shuttling 2. In disease contexts, NPM3 demonstrates oncogenic properties across multiple cancer types, with elevated expression associated with poor prognosis in lung adenocarcinoma, gastric cancer, and prostate cancer 345. NPM3 promotes tumor progression by enhancing cell proliferation and migration, and contributes to immune escape mechanisms through regulation of PD-L1 expression 4. The protein is also involved in vasculogenic mimicry formation in lung adenocarcinoma, supporting tumor aggressiveness and metastasis 6. These findings establish NPM3 as both a critical cellular chaperone and potential therapeutic target in cancer.

Sources cited
1
NPM3 is a nuclear chaperone with primary nuclear localization and wide tissue expression
PMID: 11722795
2
NPM3 functions through oligomer formation with NPM1 to regulate chromatin remodeling and modulates NPM1's activities
PMID: 22362753
3
NPM3 is upregulated in lung adenocarcinoma and associated with poor prognosis, promoting cell proliferation and migration
PMID: 37254219
4
NPM3 promotes immune escape through PD-L1 regulation in gastric cancer
PMID: 38029539
5
NPM3 is a downstream effector of JMJD2A in prostate cancer progression
PMID: 37870957
6
NPM3 is involved in vasculogenic mimicry formation in lung adenocarcinoma
PMID: 41205056
Disease Associationsⓘ20
mathematical abilityOpen Targets
0.14Weak
lung adenocarcinomaOpen Targets
0.10Suggestive
neoplasmOpen Targets
0.09Suggestive
cancerOpen Targets
0.08Suggestive
early-onset non-syndromic cataractOpen Targets
0.05Suggestive
Cataract-microcornea syndromeOpen Targets
0.05Suggestive
diabetes mellitusOpen Targets
0.05Suggestive
type 2 diabetes mellitusOpen Targets
0.05Suggestive
Cataract with Y-shaped suture opacitiesOpen Targets
0.04Suggestive
Total congenital cataractOpen Targets
0.04Suggestive
Juvenile cataract - microcornea - renal glucosuriaOpen Targets
0.04Suggestive
juvenile cataract-microcornea-renal glucosuria syndromeOpen Targets
0.04Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.04Suggestive
isolated ectopia lentisOpen Targets
0.04Suggestive
granular corneal dystrophy type IOpen Targets
0.04Suggestive
Posterior polar cataractOpen Targets
0.04Suggestive
exfoliation syndromeOpen Targets
0.04Suggestive
intelligenceOpen Targets
0.03Suggestive
cataract 35Open Targets
0.03Suggestive
hereditary hyperferritinemia with congenital cataractsOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MSL1Shared pathway100%HDGFL1Shared pathway100%HIPK4Shared pathway100%HMGB4Shared pathway100%NAA40Shared pathway100%NSD1Shared pathway100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
89%
Liver
51%
Lung
49%
Heart
44%
Brain
41%
Gene Interaction Network
Click a node to explore
NPM3MSL1HDGFL1HIPK4HMGB4NAA40NSD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt O75607
View on AlphaFold ↗
RankingsWhere NPM3 stands among ~20K protein-coding genes
  • #4,847of 20,598
    Most Researched99 · top quartile
Genes detectedNPM3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Pumilio1 regulates NPM3/NPM1 axis to promote PD-L1-mediated immune escape in gastric cancer.
PMID: 38029539
Cancer Lett · 2024
1.00
2
Cloning, expression and nuclear localization of human NPM3, a member of the nucleophosmin/nucleoplasmin family of nuclear chaperones.
PMID: 11722795
BMC Genomics · 2001
0.90
3
SET7/9-mediated methylation affects oncogenic functions of histone demethylase JMJD2A.
PMID: 37870957
JCI Insight · 2023
0.80
4
NPM3 as a novel oncogenic factor and poor prognostic marker contributes to cell proliferation and migration in lung adenocarcinoma.
PMID: 37254219
Hereditas · 2023
0.70
5
Identification of target cells of human papillomavirus 18 using squamocolumnar junction organoids.
PMID: 37996972
Cancer Sci · 2024
0.60