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GeneE
50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
NR3C1
nuclear receptor subfamily 3 group C member 1
Chromosome 5 Β· 5q31.3
NCBI Gene: 2908Ensembl: ENSG00000113580.16HGNC: HGNC:7978UniProt: E5KQF5
1,291PubMed Papers
21Diseases
71Drugs
16Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub GeneReceptorTranscription Factor
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
TBP-class protein bindingcellular response to glucocorticoid stimuluscellular response to dexamethasone stimuluscellular response to transforming growth factor beta stimulusglucocorticoid resistancechronic obstructive pulmonary diseasemultiple sclerosisasthma
✦AI Summary

NR3C1 encodes the glucocorticoid receptor (GR), a ligand-activated transcription factor that serves as a master regulator of stress responses and metabolic homeostasis. As a steroid hormone receptor, NR3C1 binds glucocorticoids and DNA to modulate transcription through both activation and repression mechanisms 1. The gene produces multiple isoforms with differential transcriptional activities, with certain variants showing lowest activation capacity 2. NR3C1 functions through classical nuclear receptor mechanisms involving TBP binding, RNA polymerase II recruitment, and interaction with Hsp90 chaperones, enabling responses to glucocorticoids, dexamethasone, and TGF-Ξ² signaling. Pathologically, NR3C1 mutations cause generalized glucocorticoid resistance (Chr5 syndrome), a rare disorder producing tissue-wide insensitivity to glucocorticoids 3. NR3C1 variants also influence HPA axis-related phenotypes in major depression, with specific polymorphisms predicting attention, working memory, and verbal memory performance independent of cortisol levels 4. Epigenetically, perinatal stress induces NR3C1 promoter hypermethylation, associating with adverse long-term health outcomes 56. Clinically, elevated NR3C1 expression driven by super-enhancers promotes chemotherapy resistance in gastric cancer and supports oncogenic gene expression in lymphomas by preventing repressor binding 78. In pancreatic Ξ²-cells, NR3C1 activation paradoxically drives excessive autophagy under metabolic stress, impairing insulin secretion and promoting diabetes 9.

Sources cited
1
NR3C1 exhibits transcriptional repression activity
PMID: 23303127
2
NR3C1 alternative isoforms have differential transcriptional activation capacity
PMID: 15866175
3
NR3C1 genetic defects cause generalized glucocorticoid resistance (Chrousos syndrome)
PMID: 31588529
4
NR3C1 polymorphisms predict cognitive performance in depression independent of cortisol levels
PMID: 27528460
5
Perinatal stress associates with NR3C1 methylation in exon 1F region of newborns
PMID: 34519616
6
NR3C1 methylation during first 1000 days increases with stress exposures and associates with developmental outcomes
PMID: 33689802
7
Super-enhancer-driven NR3C1 overexpression promotes 5-FU chemotherapy resistance in gastric cancer
PMID: 39731339
8
NR3C1 acts as a transcriptional repressor of BCL2 and CXCR4 oncogenes, and hypermutated super-enhancers prevent this repression in DLBCL
PMID: 35794478
9
NR3C1 activation in pancreatic Ξ²-cells promotes excessive autophagy under glucolipotoxic conditions through FTO-m6A-Atg gene axis, impairing insulin secretion
PMID: 37039556
Disease Associationsβ“˜21
glucocorticoid resistanceOpen Targets
0.81Strong
chronic obstructive pulmonary diseaseOpen Targets
0.70Strong
multiple sclerosisOpen Targets
0.68Moderate
asthmaOpen Targets
0.63Moderate
rheumatoid arthritisOpen Targets
0.63Moderate
ulcerative colitisOpen Targets
0.62Moderate
autoimmune thrombocytopenic purpuraOpen Targets
0.62Moderate
multiple myelomaOpen Targets
0.62Moderate
infectionOpen Targets
0.61Moderate
osteoarthritisOpen Targets
0.61Moderate
frozen shoulderOpen Targets
0.61Moderate
sarcoidosisOpen Targets
0.61Moderate
nephrotic syndromeOpen Targets
0.61Moderate
cancerOpen Targets
0.61Moderate
Crohn's diseaseOpen Targets
0.61Moderate
atopic eczemaOpen Targets
0.61Moderate
lymphomaOpen Targets
0.61Moderate
inflammationOpen Targets
0.61Moderate
allergic rhinitisOpen Targets
0.61Moderate
pneumoniaOpen Targets
0.61Moderate
Glucocorticoid resistance, generalizedUniProt
Pathogenic Variants16
NM_000176.3(NR3C1):c.2182-1G>ALikely pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2025
NM_000176.3(NR3C1):c.2009T>C (p.Leu670Pro)Likely pathogenic
Deficiency of galactokinase
β˜…β˜†β˜†β˜†2025β†’ Residue 670
NM_000176.3(NR3C1):c.1405C>T (p.Arg469Ter)Pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2024β†’ Residue 469
NM_000176.3(NR3C1):c.2186T>C (p.Val729Ala)Likely pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2024β†’ Residue 729
NM_000176.3(NR3C1):c.678_679delinsA (p.Pro227fs)Likely pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2024β†’ Residue 227
NM_000176.3(NR3C1):c.1835del (p.Ser612fs)Pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2023β†’ Residue 612
NM_000176.3(NR3C1):c.1185-2A>GLikely pathogenic
Glucocorticoid resistance
β˜…β˜†β˜†β˜†2022
NM_000176.3(NR3C1):c.1435C>T (p.Arg479Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2020β†’ Residue 479
NM_000176.3(NR3C1):c.2318T>C (p.Leu773Pro)Pathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†2021β†’ Residue 773
NM_000176.3(NR3C1):c.2209T>C (p.Phe737Leu)Pathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†2006β†’ Residue 737
NM_000176.3(NR3C1):c.2241T>G (p.Ile747Met)Pathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†2002β†’ Residue 747
NM_000176.3(NR3C1):c.1712T>C (p.Val571Ala)Pathogenic
GLUCOCORTICOID RESISTANCE, ATYPICAL
β˜†β˜†β˜†β˜†2002β†’ Residue 571
NM_000176.3(NR3C1):c.1676T>A (p.Ile559Asn)Pathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†2001β†’ Residue 559
NM_000176.3(NR3C1):c.1891_1892+2delPathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†1996
NM_000176.3(NR3C1):c.2259A>T (p.Leu753Phe)Pathogenic
GLUCOCORTICOID RESISTANCE, CELLULAR
β˜†β˜†β˜†β˜†1993β†’ Residue 753
NM_000176.3(NR3C1):c.1922A>T (p.Asp641Val)Pathogenic
Glucocorticoid resistance
β˜†β˜†β˜†β˜†1991β†’ Residue 641
View on ClinVar β†—
Drug Targets71
ABBV-3373Phase II
TNF-alpha binding agent
rheumatoid arthritis
ALCLOMETASONE DIPROPIONATEApproved
Glucocorticoid receptor agonist
skin disease
AMCINONIDEApproved
Glucocorticoid receptor agonist
inflammation
AZD-5423Phase II
Glucocorticoid receptor modulator
chronic obstructive pulmonary disease
BECLOMETHASONE DIPROPIONATEApproved
Glucocorticoid receptor agonist
asthma
BETAMETHASONEApproved
Glucocorticoid receptor agonist
hemorrhoid
BETAMETHASONE ACETATEApproved
Glucocorticoid receptor agonist
nephrotic syndrome
BETAMETHASONE BENZOATEApproved
Glucocorticoid receptor agonist
inflammation
BETAMETHASONE DIPROPIONATEApproved
Glucocorticoid receptor agonist
skin disease
BETAMETHASONE SODIUM PHOSPHATEApproved
Glucocorticoid receptor agonist
ulcerative colitis
BETAMETHASONE VALERATEApproved
Glucocorticoid receptor agonist
skin disease
BUDESONIDEApproved
Glucocorticoid receptor agonist
ulcerative colitis
CICLESONIDEApproved
Glucocorticoid receptor agonist
allergic rhinitis
CLOBETASOL PROPIONATEApproved
Glucocorticoid receptor agonist
skin disease
CLOCORTOLONE PIVALATEPhase I
Glucocorticoid receptor agonist
CORT 108297Phase II
Glucocorticoid receptor antagonist
post-traumatic stress disorder
CORTISONE ACETATEApproved
Glucocorticoid receptor agonist
tenosynovitis
CORTIVAZOLUNKNOWN
Glucocorticoid receptor agonist
CYPROTERONE ACETATEPhase III
Glucocorticoid receptor antagonist
prostate cancer
DEFLAZACORTApproved
Glucocorticoid receptor agonist
Duchenne muscular dystrophy
DESONIDEApproved
Glucocorticoid receptor agonist
skin disease
DESOXIMETASONEApproved
Glucocorticoid receptor agonist
skin disease
DEXAMETHASONEApproved
Glucocorticoid receptor agonist
infection
DEXAMETHASONE ACETATEPhase III
Glucocorticoid receptor agonist
DEXAMETHASONE PHOSPHORIC ACIDPhase III
Glucocorticoid receptor agonist
dry eye syndrome
DEXAMETHASONE SODIUM PHOSPHATEApproved
Glucocorticoid receptor agonist
atopic eczema
DIFLORASONE DIACETATEApproved
Glucocorticoid receptor agonist
skin disease
DIFLUPREDNATEApproved
Glucocorticoid receptor agonist
inflammation
FLUMETHASONE PIVALATEApproved
Glucocorticoid receptor agonist
contact dermatitis
FLUNISOLIDEApproved
Glucocorticoid receptor agonist
rhinitis
FLUOCINOLONE ACETONIDEApproved
Glucocorticoid receptor agonist
skin disease
FLUOCINONIDEApproved
Glucocorticoid receptor agonist
skin disease
FLUOROMETHOLONEApproved
Glucocorticoid receptor agonist
inflammation
FLUPREDNISOLONEApproved
Glucocorticoid receptor agonist
asthma
FLURANDRENOLIDEApproved
Glucocorticoid receptor agonist
skin disease
FLUTICASONE FUROATEApproved
Glucocorticoid receptor agonist
FLUTICASONE PROPIONATEApproved
Glucocorticoid receptor agonist
asthma
FOSDAGROCORATPhase II
Glucocorticoid receptor modulator
rheumatoid arthritis
HALCINONIDEApproved
Glucocorticoid receptor agonist
skin disease
HALOBETASOL PROPIONATEApproved
Glucocorticoid receptor agonist
psoriasis vulgaris
HYDROCORTAMATEApproved
Glucocorticoid receptor agonist
inflammation
HYDROCORTISONEApproved
Glucocorticoid receptor agonist
inflammation
HYDROCORTISONE ACETATEApproved
Glucocorticoid receptor agonist
skin disease
HYDROCORTISONE BUTYRATEApproved
Glucocorticoid receptor agonist
atopic eczema
HYDROCORTISONE PROBUTATEApproved
Glucocorticoid receptor agonist
skin disease
HYDROCORTISONE SODIUM SUCCINATEApproved
Glucocorticoid receptor agonist
asthma
LOTEPREDNOL ETABONATEApproved
Glucocorticoid receptor agonist
inflammation
MAPRACORATPhase III
Glucocorticoid receptor agonist
MEDRYSONEApproved
Glucocorticoid receptor agonist
eye inflammation
MEPREDNISONEApproved
Glucocorticoid receptor agonist
chronic obstructive pulmonary disease
METHYLPREDNISOLONEApproved
Glucocorticoid receptor agonist
psoriatic arthritis
METHYLPREDNISOLONE ACETATEApproved
Glucocorticoid receptor agonist
leukemia
METHYLPREDNISOLONE HEMISUCCINATEPhase I
Glucocorticoid receptor agonist
multiple sclerosis
METHYLPREDNISOLONE SODIUM SUCCINATEApproved
Glucocorticoid receptor agonist
multiple sclerosis
MIFEPRISTONEApproved
Progesterone receptor antagonist
MOMETASONE FUROATEApproved
Glucocorticoid receptor agonist
asthma
ORG-34517Phase II
Glucocorticoid receptor antagonist
depressive disorder
PREDNICARBATEApproved
Glucocorticoid receptor agonist
skin disease
PREDNISOLONEApproved
Glucocorticoid receptor agonist
osteoarthritis
PREDNISOLONE ACETATEApproved
Glucocorticoid receptor agonist
inflammation
PREDNISOLONE PHOSPHORIC ACIDPhase III
Glucocorticoid receptor agonist
Herpes simplex virus keratitis
PREDNISOLONE SODIUM PHOSPHATEApproved
Glucocorticoid receptor agonist
uveitis
PREDNISONEApproved
Glucocorticoid receptor agonist
berylliosis
RELACORILANTPhase III
Glucocorticoid receptor antagonist
RIMEXOLONEApproved
Glucocorticoid receptor agonist
arthritis
TRIAMCINOLONEApproved
Glucocorticoid receptor agonist
skin disease
TRIAMCINOLONE ACETONIDEApproved
Glucocorticoid receptor agonist
seasonal allergic rhinitis
TRIAMCINOLONE DIACETATEUNKNOWN
Glucocorticoid receptor agonist
TRIAMCINOLONE HEXACETONIDEApproved
Glucocorticoid receptor agonist
osteoarthritis
VAMOROLONEApproved
Glucocorticoid receptor agonist
Duchenne muscular dystrophy
VELSECORATPhase II
Glucocorticoid receptor modulator
chronic obstructive pulmonary disease
Related Genes
HSP90AB1Protein interaction100%HSP90AA1Protein interaction100%PER2Protein interaction100%RELAProtein interaction100%HSPA4Protein interaction100%EP300Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
84%
Lung
78%
Brain
67%
Liver
65%
Ovary
37%
Gene Interaction Network
Click a node to explore
NR3C1HSP90AB1HSP90AA1PER2RELAHSPA4EP300
PROTEIN STRUCTURE
Preparing viewer…
PDB4UDD Β· 1.80 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.29Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.18 [0.12–0.29]
RankingsWhere NR3C1 stands among ~20K protein-coding genes
  • #109of 20,598
    Most Researched1,291 Β· top 1%
  • #38of 1,025
    FDA-Approved Drug Targets55 Β· top 5%
  • #2,376of 5,498
    Most Pathogenic Variants16
  • #1,089of 17,882
    Most Constrained (LOEUF)0.29 Β· top 10%
Genes detectedNR3C1
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
Super-enhancer hypermutation alters oncogene expression in B cell lymphoma.
PMID: 35794478
Nature Β· 2022
1.00
2
HPA axis in major depression: cortisol, clinical symptomatology and genetic variation predict cognition.
PMID: 27528460
Mol Psychiatry Β· 2017
0.90
3
NG2 is a target gene of MLL-AF4 and underlies glucocorticoid resistance in MLLr B-ALL by regulatingΒ NR3C1 expression.
PMID: 39093982
Blood Β· 2024
0.86
4
Lung NR3C1
PMID: 40993192
Commun Biol Β· 2025
0.82
5
Glucocorticoid Resistance.
PMID: 31588529
Exp Suppl Β· 2019
0.80