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GeneE
4 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NTPCR
nucleoside-triphosphatase, cancer-related
Chromosome 1 · 1q42.2
NCBI Gene: 84284Ensembl: ENSG00000135778.13HGNC: HGNC:28204UniProt: Q5TDE9
105PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA bindingmitochondrionmembraneribonucleoside triphosphate phosphatase activityamblyopiapoisoningresponse to xenobiotic stimulusosteonecrosis
✦AI Summary

NTPCR is a nucleoside-triphosphatase with catalytic activity toward purine and pyrimidine nucleoside triphosphates (ATP, GTP, CTP, TTP, UTP), functioning with lower efficiency on nucleoside diphosphates 1. The protein localizes to cellular membranes and mitochondria, where it exhibits ribonucleoside triphosphate phosphatase activity and possesses RNA-binding capacity, suggesting roles in nucleotide metabolism and RNA regulation. Clinically, NTPCR has emerged as a biomarker in pancreatic pathology. It was identified as one of five discriminatory proteins distinguishing low-grade from high-grade/invasive intraductal papillary mucinous neoplasms (IPMNs) of the pancreas, contributing to a combined five-protein model achieving 94% accuracy in malignancy prediction 1. Additionally, NTPCR was identified among ten purine metabolism-related genes associated with thyroid eye disease (TED), an autoimmune inflammatory disorder, with involvement in purine nucleotide metabolism and RNA splicing pathways 2. Protein-protein interaction network analysis predicts NTPCR interacts with alkaline phosphatase (ALPL) and participates in pathways affecting bone formation, homeostasis, and metabolism, with potential relevance to hypophosphatasia pathogenesis 3. These findings position NTPCR as a pleiotropic enzyme with potential diagnostic value in malignant pancreatic lesions and autoimmune diseases, though mechanistic details require further investigation.

Sources cited
1
NTPCR identified as one of five discriminatory biomarkers distinguishing low-grade from high-grade/invasive pancreatic IPMN with AUC >0.75; part of combined five-protein model with bootstrap-corrected AUC of 0.94
PMID: 40300662
2
NTPCR identified as one of ten purine metabolism-related genes associated with thyroid eye disease; participates in purine nucleotide metabolism and RNA splicing pathways
PMID: 37884559
3
NTPCR predicted to interact with ALPL in protein-protein interaction network; potentially impacts bone formation, homeostasis, metabolism, and gene expression in hypophosphatasia
PMID: 41158885
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
amblyopiaOpen Targets
0.04Suggestive
poisoningOpen Targets
0.04Suggestive
response to xenobiotic stimulusOpen Targets
0.04Suggestive
osteonecrosisOpen Targets
0.03Suggestive
food allergyOpen Targets
0.03Suggestive
Parkinson diseaseOpen Targets
0.03Suggestive
Failure to thriveOpen Targets
0.03Suggestive
muscle crampOpen Targets
0.02Suggestive
breast diseaseOpen Targets
0.02Suggestive
benign chondrogenic neoplasmOpen Targets
0.02Suggestive
preeclampsiaOpen Targets
0.02Suggestive
hepatitis C virus infectionOpen Targets
0.01Suggestive
neuroblastomaOpen Targets
0.01Suggestive
toxoplasmosisOpen Targets
0.01Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
Lesch-Nyhan syndromeOpen Targets
0.01Suggestive
Myocardial IschemiaOpen Targets
0.01Suggestive
melanomaOpen Targets
0.01Suggestive
prostate cancerOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NME1-NME2Protein interaction96%AK9Protein interaction95%AK1Protein interaction95%AK2Protein interaction95%AK4Protein interaction95%ENTPD2Protein interaction95%
Tissue Expression6 tissues
Brain
100%
Heart
86%
Ovary
44%
Liver
40%
Lung
38%
Bone Marrow
22%
Gene Interaction Network
Click a node to explore
NTPCRNME1-NME2AK9AK1AK2AK4ENTPD2
PROTEIN STRUCTURE
Preparing viewer…
PDB2I3B · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.25LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.76 [0.47–1.25]
RankingsWhere NTPCR stands among ~20K protein-coding genes
  • #4,548of 20,598
    Most Researched105 · top quartile
  • #13,193of 17,882
    Most Constrained (LOEUF)1.25
Genes detectedNTPCR
Sources retrieved4 papers
Response time—
📄 Sources
4
1
Cyst fluid proteins stratify malignant risk of intraductal papillary mucinous neoplasm of the pancreas.
PMID: 40300662
Cancer Lett · 2025
1.00
2
Purine metabolism-related genes and immunization in thyroid eye disease were validated using bioinformatics and machine learning.
PMID: 37884559
Sci Rep · 2023
0.75
3
Novel Insights From In Silico Analysis of Biallelic ALPL (c.1001G/A and c.571G/A) in Two Mennonite Families Leading to Hypophosphatasia.
PMID: 41158885
Cureus · 2025
0.50
4
Analysis of the full-length genome of a subgenotype IIIB hepatitis A virus isolate: primers for broadly reactive PCR and genotypic analysis.
PMID: 17133545
J Med Virol · 2007
0.25