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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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NUDT12
nudix hydrolase 12
Chromosome 5 · 5q21.2
NCBI Gene: 83594Ensembl: ENSG00000112874.11HGNC: HGNC:18826UniProt: Q9BQG2
44PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
NAD-cap decappingNAD+ catabolic processNAD+ diphosphatase activityNADH pyrophosphatase activityBack paincrush injurytype 2 diabetes mellitusgastritis
✦AI Summary

NUDT12 is a mammalian Nudix hydrolase that functions as a specialized mRNA decapping enzyme with distinct substrate preferences and cellular roles. The protein primarily operates as an NAD-cap decapping enzyme, specifically removing nicotinamide adenine dinucleotide (NAD) caps from mRNAs by hydrolyzing the diphosphate linkage to produce nicotinamide mononucleotide and 5' monophosphate mRNA 1. NUDT12 functions exclusively as homodimers, with each monomer contributing to the formation of two functional catalytic pockets 2. The enzyme shows preferential activity toward reduced nicotinamide nucleotides (NADH, NADPH) over oxidized forms, with Km values of 11μM for NADH and 190μM for NAD+ 3. NUDT12 localizes to peroxisomes via a C-terminal PNL targeting signal and forms a large dodecamer complex with bleomycin hydrolase (BLMH) in discrete cytoplasmic granules distinct from P-bodies 32. The enzyme plays important regulatory roles in cellular metabolism, particularly responding to nutrient stress by targeting NAD-capped transcripts encoding proteins involved in cellular energetics 1. Loss of Nudt12 leads to significant upregulation of circadian clock transcripts in mouse liver, indicating its involvement in circadian regulation 2. Additionally, NUDT12 shows disease associations, being upregulated in diabetic peripheral neuropathy and showing differential methylation patterns in essential hypertension 45.

Sources cited
1
NUDT12 removes NAD caps from mRNAs via diphosphate linkage hydrolysis and targets transcripts involved in cellular energetics during nutrient stress
PMID: 31101919
2
NUDT12 functions as homodimers, forms complexes with BLMH in cytoplasmic granules, and regulates circadian clock transcripts
PMID: 31875550
3
NUDT12 preferentially hydrolyzes reduced nicotinamide nucleotides and localizes to peroxisomes via C-terminal PNL signal
PMID: 12790796
4
NUDT12 is upregulated in diabetic peripheral neuropathy patients
PMID: 38464965
5
NUDT12 shows differential methylation patterns associated with essential hypertension
PMID: 40143670
Disease Associationsⓘ20
Back painOpen Targets
0.34Weak
crush injuryOpen Targets
0.29Weak
type 2 diabetes mellitusOpen Targets
0.24Weak
gastritisOpen Targets
0.23Weak
smoking initiationOpen Targets
0.22Weak
dysthymic disorderOpen Targets
0.21Weak
diabetes mellitusOpen Targets
0.21Weak
major depressive disorderOpen Targets
0.21Weak
congenital anomaly of kidney and urinary tractOpen Targets
0.20Weak
polymyalgia rheumaticaOpen Targets
0.20Weak
polycystic ovary syndromeOpen Targets
0.20Weak
heart diseaseOpen Targets
0.19Weak
Abruptio PlacentaeOpen Targets
0.19Weak
placenta praeviaOpen Targets
0.18Weak
thyroiditisOpen Targets
0.18Weak
vertebral column disorderOpen Targets
0.17Weak
multinodular goiterOpen Targets
0.17Weak
kidney transplantOpen Targets
0.17Weak
protozoa infectious diseaseOpen Targets
0.17Weak
ovarian neoplasmOpen Targets
0.16Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
Preparing viewer…
PDB6SCX · 2.92 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.24LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.90 [0.67–1.24]
RankingsWhere NUDT12 stands among ~20K protein-coding genes
  • #9,626of 20,598
    Most Researched44
  • #13,067of 17,882
    Most Constrained (LOEUF)1.24
Genes detectedNUDT12
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Mammalian NADH diphosphatases of the Nudix family: cloning and characterization of the human peroxisomal NUDT12 protein.
PMID: 12790796
Biochem J · 2003
1.00
2
Identification and validation of NAD+ metabolism-related biomarkers in patients with diabetic peripheral neuropathy.
PMID: 38464965
Front Endocrinol (Lausanne) · 2024
0.90
3
Smoking-informed methylation and expression QTLs in human brain and colocalization with smoking-associated genetic loci.
PMID: 37790540
medRxiv · 2023
0.80
4
Differential methylation in blood pressure control genes is associated to essential hypertension in African Brazilian populations.
PMID: 40143670
Epigenetics · 2025
0.70
5
Mammalian Nudix proteins cleave nucleotide metabolite caps on RNAs.
PMID: 32432673
Nucleic Acids Res · 2020
0.60