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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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OPN3
opsin 3
Chromosome 1 · 1q43
NCBI Gene: 23596Ensembl: ENSG00000054277.14HGNC: HGNC:14007UniProt: Q9H1Y3
40PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cellular response to UV-Anegative regulation of apoptotic processcytoplasmnegative regulation of melanin biosynthetic processsecondary malignant neoplasmovarian neoplasmalopecia areataneurodegenerative disease
✦AI Summary

OPN3 is a G protein-coupled receptor that functions as a light-dependent and light-independent photoreceptor with diverse roles in skin physiology and systemic homeostasis. As a photoreceptor, OPN3 selectively activates Gi/o proteins in response to ultraviolet A and blue light, decreasing cellular cAMP levels 12. The protein binds both 11-cis and all-trans retinal 3, though certain missense mutations severely impair retinal binding and calcium signaling 4. In melanocytes, OPN3 regulates melanogenesis through both light-independent and light-dependent mechanisms by inhibiting MC1R-evoked cAMP signaling and modulating calcium-dependent kinase pathways 13. OPN3 also interacts functionally with BRAFV600E signaling in congenital melanocytic nevus cells 5. Beyond pigmentation, OPN3 promotes melanocyte survival via intracellular calcium regulation and BCL2/RAF1 signaling 6. In keratinocytes, light-induced OPN3 activation triggers proinflammatory cytokine production through calcium influx and sphingosine 1-phosphate signaling, exaggerating atopic dermatitis 7. In the hypothalamic paraventricular nucleus, OPN3 suppresses MC4R signaling and potentiates Kir7.1 channel activity to promote food intake 8. Additionally, OPN3 promotes angiogenesis in endothelial cells through VEGFR2 interaction 9. High OPN3 expression associates with poor prognosis in multiple cancer types 1011.

Sources cited
1
The protein binds both 11-cis and all-trans retinal , though certain missense mutations severely impair retinal binding and calcium signaling .
PMID: 31097585
2
The protein binds both 11-cis and all-trans retinal , though certain missense mutations severely impair retinal binding and calcium signaling .
PMID: 36017595
3
OPN3 also interacts functionally with BRAFV600E signaling in congenital melanocytic nevus cells .
PMID: 35577105
4
Beyond pigmentation, OPN3 promotes melanocyte survival via intracellular calcium regulation and BCL2/RAF1 signaling .
PMID: 31730232
5
In keratinocytes, light-induced OPN3 activation triggers proinflammatory cytokine production through calcium influx and sphingosine 1-phosphate signaling, exaggerating atopic dermatitis .
PMID: 40451489
6
In the hypothalamic paraventricular nucleus, OPN3 suppresses MC4R signaling and potentiates Kir7.1 channel activity to promote food intake .
PMID: 39951488
7
Additionally, OPN3 promotes angiogenesis in endothelial cells through VEGFR2 interaction .
PMID: 40164822
Disease Associationsⓘ20
secondary malignant neoplasmOpen Targets
0.28Weak
ovarian neoplasmOpen Targets
0.28Weak
alopecia areataOpen Targets
0.27Weak
neurodegenerative diseaseOpen Targets
0.26Weak
lung adenocarcinomaOpen Targets
0.09Suggestive
glomerulonephritisOpen Targets
0.09Suggestive
myopiaOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
triple-negative breast cancerOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.07Suggestive
mathematical abilityOpen Targets
0.06Suggestive
renal osteodystrophyOpen Targets
0.06Suggestive
gliomaOpen Targets
0.04Suggestive
chronic myelogenous leukemiaOpen Targets
0.04Suggestive
melanomaOpen Targets
0.03Suggestive
neutropenia, severe congenital, 1, autosomal dominantOpen Targets
0.03Suggestive
pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 9Open Targets
0.03Suggestive
reticular dysgenesisOpen Targets
0.03Suggestive
glioblastoma multiformeOpen Targets
0.03Suggestive
pulpitisOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CHMLProtein interaction97%KMOProtein interaction87%EIF2B4Protein interaction79%EIF2B3Protein interaction79%EIF2B2Protein interaction79%EIF2B5Protein interaction79%
Tissue Expression6 tissues
Brain
100%
Liver
42%
Lung
25%
Heart
21%
Bone Marrow
14%
Ovary
12%
Gene Interaction Network
Click a node to explore
OPN3CHMLKMOEIF2B4EIF2B3EIF2B2EIF2B5
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9H1Y3
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.16LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.85 [0.63–1.16]
RankingsWhere OPN3 stands among ~20K protein-coding genes
  • #10,218of 20,598
    Most Researched40
  • #12,132of 17,882
    Most Constrained (LOEUF)1.16
Genes detectedOPN3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Opsin 3 in keratinocytes mediates the light-induced exaggeration of atopic dermatitis.
PMID: 40451489
J Allergy Clin Immunol · 2025
1.00
2
Integrated analysis of the prognostic and oncogenic roles of OPN3 in human cancers.
PMID: 35180853
BMC Cancer · 2022
0.90
3
OPN3-mediated positive regulation of angiogenesis in HUVECs through VEGFR2 interaction.
PMID: 40164822
Commun Biol · 2025
0.80
4
Hypothalamic opsin 3 suppresses MC4R signaling and potentiates Kir7.1 to promote food consumption.
PMID: 39951488
Proc Natl Acad Sci U S A · 2025
0.70
5
Downregulation of OPN3 Gene Induces Ferroptosis, Apoptosis, and Pyroptosis of Human Dermal Fibroblasts In Vitro.
PMID: 38548258
J Invest Dermatol · 2024
0.60