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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
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PACS1
phosphofurin acidic cluster sorting protein 1
Chromosome 11 Β· 11q13.1-q13.2
NCBI Gene: 55690Ensembl: ENSG00000175115.13HGNC: HGNC:30032UniProt: Q6VY07
83PubMed Papers
21Diseases
0Drugs
6Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
transmembrane transporter bindingprotein localization to plasma membraneprotein bindinglymphocyte homeostasisSchuurs-Hoeijmakers syndromeIntellectual disability - craniofacial dysmorphism - cryptorchidismIntellectual disabilityHIV infection
✦AI Summary

PACS1 (phosphofurin acidic cluster sorting protein 1) is a coat protein mediating protein trafficking in the secretory pathway. It localizes trans-Golgi network (TGN) membrane proteins containing acidic cluster sorting motifs by linking their cytoplasmic domains to AP-1 adapter complexes, controlling endosome-to-Golgi trafficking of cargo proteins including furin and mannose-6-phosphate receptors 1. Beyond trafficking functions, PACS1 acts as an HDAC6 effector protein in neurons; the pathogenic Arg203Trp substitution aberrantly increases PACS1/HDAC6 interaction, reducing Ξ±-tubulin and cortactin acetylation and causing Golgi fragmentation, dendritic overgrowth with reduced spine density and impaired synaptic transmission 2. PACS1 is essential for ER calcium handling in lymphocytes through a complex with WDR37, maintaining lymphocyte quiescence and survival 3. Pathogenic PACS1 variants cause Schuurs-Hoeijmakers syndrome (SHMS), a rare neurodevelopmental disorder characterized by intellectual disability, distinctive craniofacial features (hypertelorism, thick eyebrows, downslanting palpebral fissures), seizures, and congenital anomalies 4. The recurrent p.Arg203Trp variant is diagnostic for SHMS, while other variants disrupting adaptor protein binding also cause overlapping phenotypes 5. PACS1 mutations share phenotypic overlap with WDR37 and PACS2 variants, suggesting functional convergence in neurodevelopment and ocular development 6. PACS1- and HDAC6-targeting therapies restore neuronal structure in PACS1 syndrome models, offering therapeutic potential 2.

Sources cited
1
PACS1 variants identified in cohort of intellectual disability/autism spectrum disorder patients through whole-exome sequencing
PMID: 34948243
2
PACS1R203W increases PACS1/HDAC6 interaction, reduces Ξ±-tubulin and cortactin acetylation, causes Golgi fragmentation and dendritic abnormalities; PACS1 and HDAC6-targeting therapies restore neuronal structure
PMID: 37848409
3
Coloboma is shared feature in WDR37-PACS1-PACS2 axis disorders; these genes involved in ocular and neurodevelopment
PMID: 33369122
4
Schuurs-Hoeijmakers syndrome caused by PACS1 variants with characteristic intellectual disability and distinctive craniofacial features
PMID: 40004556
5
PACS1-related neurodevelopmental disorder characterized by intellectual disability, speech delay, seizures, structural brain/heart/eye/kidney anomalies; overlaps with WDR37 and PACS2 syndromes
PMID: 37064331
6
PACS1 variants impairing adaptor protein GGA3 binding cause syndromic intellectual disability with features overlapping PACS1-NDD
PMID: 37141437
7
Pacs1-Wdr37 complex required for ER calcium handling in lymphocytes; essential for lymphocyte quiescence and survival
PMID: 33630350
Disease Associationsβ“˜21
Schuurs-Hoeijmakers syndromeOpen Targets
0.77Strong
Intellectual disability - craniofacial dysmorphism - cryptorchidismOpen Targets
0.67Moderate
Intellectual disabilityOpen Targets
0.61Moderate
HIV infectionOpen Targets
0.50Moderate
genetic disorderOpen Targets
0.42Moderate
Neurodevelopmental disorderOpen Targets
0.34Weak
Global developmental delayOpen Targets
0.34Weak
bipolar I disorderOpen Targets
0.15Weak
neurodegenerative diseaseOpen Targets
0.15Weak
goutOpen Targets
0.15Weak
bipolar disorderOpen Targets
0.13Weak
hypospadiasOpen Targets
0.12Weak
schizophreniaOpen Targets
0.11Weak
Aganglionic megacolonOpen Targets
0.11Weak
Hirschsprung diseaseOpen Targets
0.11Weak
type 2 diabetes mellitusOpen Targets
0.11Weak
obesityOpen Targets
0.08Suggestive
cardiomyopathyOpen Targets
0.08Suggestive
hypertrophic cardiomyopathyOpen Targets
0.07Suggestive
autoimmune thrombocytopenic purpuraOpen Targets
0.06Suggestive
Schuurs-Hoeijmakers syndromeUniProt
Pathogenic Variants6
NM_018026.4(PACS1):c.607C>T (p.Arg203Trp)Pathogenic
Schuurs-Hoeijmakers syndrome|Inborn genetic diseases|not provided|PACS1-related syndrome|Global developmental delay|Intellectual disability|Neurodevelopmental disorder|See cases|PACS1-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 203
NM_018026.4(PACS1):c.2690A>G (p.Glu897Gly)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 897
NM_018026.4(PACS1):c.298C>T (p.Gln100Ter)Likely pathogenic
Schuurs-Hoeijmakers syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 100
NM_018026.4(PACS1):c.755C>T (p.Ser252Phe)Likely pathogenic
Intellectual disability
β˜…β˜†β˜†β˜†2022β†’ Residue 252
NM_018026.4(PACS1):c.1574G>A (p.Arg525Lys)Pathogenic
Schuurs-Hoeijmakers syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 525
NM_018026.4(PACS1):c.2656+1G>CLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2016
View on ClinVar β†—
Related Genes
WDR72Shared pathway100%FURINProtein interaction96%PKD2Protein interaction86%CSNK2A1Protein interaction81%SORL1Protein interaction80%WDR37Protein interaction78%
Tissue Expression6 tissues
Heart
100%
Lung
65%
Brain
63%
Ovary
63%
Bone Marrow
43%
Liver
19%
Gene Interaction Network
Click a node to explore
PACS1WDR72FURINPKD2CSNK2A1SORL1WDR37
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q6VY07
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.30Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.20 [0.14–0.30]
RankingsWhere PACS1 stands among ~20K protein-coding genes
  • #5,746of 20,598
    Most Researched83
  • #3,356of 5,498
    Most Pathogenic Variants6
  • #1,144of 17,882
    Most Constrained (LOEUF)0.30 Β· top 10%
Genes detectedPACS1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
New Candidates for Autism/Intellectual Disability Identified by Whole-Exome Sequencing.
PMID: 34948243
Int J Mol Sci Β· 2021
1.00
2
Neural deficits in a mouse model of PACS1 syndrome are corrected with PACS1- or HDAC6-targeting therapy.
PMID: 37848409
Nat Commun Β· 2023
0.90
3
Coloboma may be a shared feature in a spectrum of disorders caused by mutations in the WDR37-PACS1-PACS2 axis.
PMID: 33369122
Am J Med Genet A Β· 2021
0.80
4
Expanding the Clinical Spectrum Associated with the Recurrent Arg203Trp Variant in
PMID: 40004556
Genes (Basel) Β· 2025
0.70
5
AI-Based Facial Phenotyping Supports a Shared Molecular Axis in
PMID: 40869285
Int J Mol Sci Β· 2025
0.60