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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PCDH17
protocadherin 17
Chromosome 13 · 13q21.1
NCBI Gene: 27253Ensembl: ENSG00000118946.12HGNC: HGNC:14267UniProt: O14917
59PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcell adhesioncell adhesion molecule bindingpresynaptic active zone assemblyintelligenceschizophreniamathematical abilityconnective tissue disease
✦AI Summary

PCDH17 (protocadherin 17) is a non-clustered protocadherin belonging to the δ2 subgroup, classified as a calcium-dependent cell-adhesion protein with diverse roles in neuronal and tumor biology 1. Primary Function: PCDH17 functions as a postsynaptic cell-adhesion molecule that restricts dendritic spine morphogenesis through ROCK2-dependent actin cytoskeleton regulation 2. Mechanism: PCDH17 binds ROCK2 to enhance downstream signaling through LIMK1 and cofilin phosphorylation, regulating F-actin organization and spine development 2. In vascular endothelium, PCDH17 interacts with E3 ubiquitin ligase MARCH5 to prevent VEGFR2 degradation, increasing vascular permeability 3. Disease Relevance: PCDH17 expression is frequently silenced in multiple cancers—including acute leukemia, gastric cancer, laryngeal carcinoma, ovarian cancer, and hepatocellular carcinoma—primarily through promoter hypermethylation mediated by histone deacetylation and DNMT3B activity 45678. PCDH17 downregulation promotes cancer cell proliferation, migration, invasion, and metastasis through epithelial-mesenchymal transition 83. Clinical Significance: PCDH17 is implicated in neuropsychiatric disorders including bipolar disorder and depression 2, and serves as a tumor suppressor candidate with prognostic value across multiple malignancies.

Sources cited
1
PCDH17 classification as non-clustered protocadherin δ2 subgroup member expressed predominantly in nervous system with diverse signaling partnerships
PMID: 21173574
2
PCDH17 restricts dendritic spine morphogenesis through ROCK2-mediated F-actin regulation and is associated with mood disorders
PMID: 38747058
3
PCDH17 interaction with MARCH5 prevents VEGFR2 degradation, compromising vascular integrity and promoting colorectal cancer metastasis
PMID: 39837826
4
PCDH17 functions as tumor suppressor in acute leukemia with downregulation primarily via histone deacetylation rather than DNA methylation
PMID: 31865541
5
PCDH17 promoter hypermethylation silences expression in gastric cancer, suppressing tumor-suppressive activity
PMID: 22207556
6
PCDH17/PCH68 identified as tumor suppressor gene candidate in laryngeal squamous cell carcinoma with homozygous deletion and expression downregulation
PMID: 21213369
7
PCDH17 gene promoter methylation significantly elevated in epithelial ovarian cancer versus controls with diagnostic potential
PMID: 36698136
8
PCDH17 regulated by DNMT3B-mediated methylation; low expression correlates with poor HCC prognosis and EMT-driven malignant behavior
PMID: 35688280
Disease Associationsⓘ20
intelligenceOpen Targets
0.43Moderate
schizophreniaOpen Targets
0.41Moderate
mathematical abilityOpen Targets
0.36Weak
connective tissue diseaseOpen Targets
0.34Weak
Abnormality of the skeletal systemOpen Targets
0.33Weak
ocular hypotensionOpen Targets
0.32Weak
obesityOpen Targets
0.32Weak
diabetes mellitusOpen Targets
0.31Weak
type 2 diabetes mellitusOpen Targets
0.31Weak
ovarian dysfunctionOpen Targets
0.30Weak
major depressive disorderOpen Targets
0.30Weak
liver diseaseOpen Targets
0.29Weak
gastroesophageal reflux diseaseOpen Targets
0.29Weak
Abnormality of the gastrointestinal tractOpen Targets
0.28Weak
disease of peritoneumOpen Targets
0.28Weak
Parkinson diseaseOpen Targets
0.27Weak
health study participationOpen Targets
0.27Weak
attention deficit hyperactivity disorderOpen Targets
0.26Weak
Alzheimer diseaseOpen Targets
0.26Weak
preeclampsiaOpen Targets
0.23Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FCGR1AProtein interaction74%PCDH12Protein interaction73%CDHR4Shared pathway67%PCDH11YShared pathway67%PCDH20Shared pathway67%PCDH19Shared pathway67%
Tissue Expression6 tissues
Brain
100%
Lung
81%
Heart
72%
Ovary
8%
Liver
8%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
PCDH17FCGR1APCDH12CDHR4PCDH11YPCDH20PCDH19
PROTEIN STRUCTURE
Preparing viewer…
PDB6VFT · 3.71 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.42Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.30 [0.21–0.42]
RankingsWhere PCDH17 stands among ~20K protein-coding genes
  • #7,798of 20,598
    Most Researched59
  • #2,264of 17,882
    Most Constrained (LOEUF)0.42 · top quartile
Genes detectedPCDH17
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Non-clustered protocadherin.
PMID: 21173574
Cell Adh Migr · 2011
1.00
2
PCDH17 functions as a common tumor suppressor gene in acute leukemia and its transcriptional downregulation is mediated primarily by aberrant histone acetylation, not DNA methylation.
PMID: 31865541
Int J Hematol · 2020
0.90
3
PCDH17 induces colorectal cancer metastasis by destroying the vascular endothelial barrier.
PMID: 39837826
Cell Death Dis · 2025
0.80
4
PCDH17 restricts dendritic spine morphogenesis by regulating ROCK2-dependent control of the actin cytoskeleton, modulating emotional behavior.
PMID: 38747058
Zool Res · 2024
0.70
5
PCDH17 gene promoter demethylation and cell cycle arrest by genistein in gastric cancer.
PMID: 22207556
Histol Histopathol · 2012
0.60