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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PDCL3
phosducin like 3
Chromosome 2 · 2q11.2
NCBI Gene: 79031Ensembl: ENSG00000115539.16HGNC: HGNC:28860UniProt: Q9H2J4
51PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of endothelial cell proliferationpositive regulation of angiogenesisregulation of peptidyl-tyrosine phosphorylationnegative regulation of ubiquitin-dependent protein catabolic processovarian neoplasmsmoking cessationAbnormality of the genital systempost term pregnancy
✦AI Summary

PDCL3 (phosducin-like 3) is a multifunctional chaperone protein with primary roles in angiogenesis and cytoskeletal regulation. Its primary function involves stabilizing the angiogenic receptor VEGFR-2 by binding to its juxtamembrane domain and inhibiting ubiquitination-mediated degradation, thereby increasing VEGFR-2 abundance and promoting VEGF-induced receptor phosphorylation 1. PDCL3 expression is regulated by hypoxia and undergoes N-terminal methionine acetylation, modifications affecting its stability and VEGFR-2 interaction 2. Mechanistically, PDCL3 also inhibits the folding activity of the chaperonin-containing T-complex (CCT), suppressing actin cytoskeleton organization 3. Clinically, PDCL3 demonstrates significant disease relevance across multiple conditions. Loss-of-function mutations in PDCL3 cause megacystis-microcolon-intestinal-hypoperistalsis syndrome (MMIHS), a severe congenital visceral myopathy affecting smooth muscle contractility 3. PDCL3 upregulation promotes glioma progression by enhancing VEGFR-2 expression and activating the VEGF signaling pathway, correlating with poor prognosis 45. Genome-wide association studies identified PDCL3 variants associated with Alzheimer's disease risk 6. In colorectal cancer, PDCL3 emerges as a protective prognostic factor within cuproptosis and disulfidptosis pathways 7. Overall, PDCL3 functions as a context-dependent regulator—protective in inherited visceral diseases and colorectal cancer but promoting pathological angiogenesis in glioma.

Sources cited
1
PDCL3 stabilizes VEGFR-2 by inhibiting ubiquitination and degradation, serving as a novel chaperone protein required for angiogenesis
PMID: 23792958
2
Hypoxia-induced PDCL3 expression is regulated by N-terminal methionine acetylation and protects VEGFR-2 from misfolding and aggregation
PMID: 26059764
3
PDCL3 loss-of-function mutations cause megacystis-microcolon-intestinal-hypoperistalsis syndrome through defective actin folding in smooth muscle
PMID: 32621347
4
PDCL3 upregulation in glioma activates VEGF signaling pathway and serves as an independent adverse prognostic marker
PMID: 39107869
5
PDCL3 upregulation in glioma-associated mesenchymal stem cells promotes pericyte differentiation and angiogenesis through VEGFR-2
PMID: 40469100
6
PDCL3 variants achieved genome-wide significance association with Alzheimer's disease risk in family-based GWAS meta-analysis
PMID: 26830138
7
PDCL3 functions as a protective prognostic factor in colorectal cancer within cuproptosis and disulfidptosis pathways
PMID: 38643947
Disease Associationsⓘ20
ovarian neoplasmOpen Targets
0.34Weak
smoking cessationOpen Targets
0.32Weak
Abnormality of the genital systemOpen Targets
0.30Weak
post term pregnancyOpen Targets
0.30Weak
cancerOpen Targets
0.09Suggestive
gliomaOpen Targets
0.09Suggestive
metabolic diseaseOpen Targets
0.08Suggestive
substance-related disorderOpen Targets
0.07Suggestive
oral mucosa leukoplakiaOpen Targets
0.07Suggestive
uterine prolapseOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.06Suggestive
alopecia areataOpen Targets
0.05Suggestive
mathematical abilityOpen Targets
0.05Suggestive
lung adenocarcinomaOpen Targets
0.05Suggestive
intelligenceOpen Targets
0.05Suggestive
liver cancerOpen Targets
0.04Suggestive
rheumatoid arthritisOpen Targets
0.04Suggestive
type 1 diabetes mellitusOpen Targets
0.04Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
irritable bowel syndromeOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CCT6AProtein interaction99%PDCLProtein interaction99%FBXW4Protein interaction99%TCP1Protein interaction99%CCT3Protein interaction99%CCT7Protein interaction99%
Tissue Expression6 tissues
Heart
100%
Brain
86%
Lung
65%
Ovary
47%
Bone Marrow
39%
Liver
36%
Gene Interaction Network
Click a node to explore
PDCL3CCT6APDCLFBXW4TCP1CCT3CCT7
PROTEIN STRUCTURE
Preparing viewer…
PDB7NVM · 3.10 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.23LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.87 [0.63–1.23]
RankingsWhere PDCL3 stands among ~20K protein-coding genes
  • #8,709of 20,598
    Most Researched51
  • #12,995of 17,882
    Most Constrained (LOEUF)1.23
Genes detectedPDCL3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Fetal megacystis-microcolon: Genetic mutational spectrum and identification of PDCL3 as a novel candidate gene.
PMID: 32621347
Clin Genet · 2020
1.00
2
PDCL3 promotes the vasculogenic mimicry of glioma-associated mesenchymal stem cells through VEGFR-2 in glioma environment.
PMID: 40469100
iScience · 2025
0.90
3
PDCL3 as a prognostic factor and associated with the VEGF signaling pathway in glioma.
PMID: 39107869
J Gene Med · 2024
0.80
4
Identification and validation of cuproptosis and disulfidptosis related genes in colorectal cancer.
PMID: 38643947
Cell Signal · 2024
0.70
5
Phosducin-like 3 is a novel prognostic and onco-immunological biomarker in glioma: A multi-omics analysis with experimental verification.
PMID: 37006287
Front Immunol · 2023
0.60