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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PDLIM1
PDZ and LIM domain 1
Chromosome 10 · 10q23.33
NCBI Gene: 9124Ensembl: ENSG00000107438.10HGNC: HGNC:2067UniProt: O00151
121PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytoskeletonfocal adhesionactin cytoskeletoncadherin binding involved in cell-cell adhesionatrial fibrillationuterine fibroidovarian dysfunctionliver disease
✦AI Summary

PDLIM1 is a cytoskeletal adapter protein that functions as a platform for forming protein complexes involved in multiple physiological processes. Primary Function: PDLIM1 acts as a cytoskeletal organizer that brings kinases and other proteins to the cytoskeleton 1, and is required for assembly, disassembly, and organization of stress fibers in fibroblasts, including localization of ACTN1 and PALLD to stress fibers. It maintains cell polarity and facilitates fibroblast migration. Mechanism: PDLIM1 competitively binds alpha-actinin 4 (ACTN4), preventing excessive F-actin accumulation 2. In spermatogenesis, PDLIM1 orchestrates ectoplasmic specialization to regulate cytoskeleton assembly during spermatid release 3. PDLIM1 also regulates β-catenin expression in vascular endothelial cells 4. Disease Relevance: PDLIM1 is significantly downregulated in metastatic hepatocellular carcinoma, where loss promotes epithelial-to-mesenchymal transition and invasive capacity through Hippo signaling disruption 2. Conversely, PDLIM1 is upregulated during liver fibrosis progression and hepatic stellate cell activation 5. In diabetic retinopathy, PDLIM1 suppresses pathological retinal neovascularization 4. Clinical Significance: PDLIM1 serves as a potential prognostic marker for metastatic HCC and a therapeutic target for fibrosis and retinopathy.

Sources cited
1
PDLIM1 acts as an adapter bringing kinases to the cytoskeleton
PMID: 10861853
2
PDLIM1 binds ACTN4 and suppresses HCC metastasis through Hippo signaling
PMID: 31509262
3
PDLIM1 orchestrates ectoplasmic specialization during spermatid release
PMID: 34967891
4
PDLIM1 suppresses retinal neovascularization by regulating β-catenin
PMID: 40116209
5
PDLIM1 is upregulated in liver fibrosis and promotes HSC activation
PMID: 37414929
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.14Weak
uterine fibroidOpen Targets
0.11Weak
ovarian dysfunctionOpen Targets
0.11Weak
liver diseaseOpen Targets
0.11Weak
ovarian neoplasmOpen Targets
0.10Suggestive
autosomal dominant macrothrombocytopeniaOpen Targets
0.09Suggestive
eye diseaseOpen Targets
0.09Suggestive
Peyronie diseaseOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
thrombocytopenia 7Open Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
glioblastoma multiformeOpen Targets
0.08Suggestive
bleeding disorder, platelet-type, 24Open Targets
0.08Suggestive
sarcomaOpen Targets
0.08Suggestive
platelet-type bleeding disorder 15Open Targets
0.08Suggestive
lymphomaOpen Targets
0.08Suggestive
diffuse large B-cell lymphomaOpen Targets
0.07Suggestive
thrombocytopenia 9Open Targets
0.07Suggestive
Von Willebrand diseaseOpen Targets
0.07Suggestive
beta-thalassemia-X-linked thrombocytopenia syndromeOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
STK35Protein interaction96%ESR1Protein interaction71%ACTN4Protein interaction71%ACTN1Protein interaction71%ACTN2Protein interaction71%PDLIM5Protein interaction58%
Tissue Expression6 tissues
Lung
100%
Heart
78%
Liver
29%
Brain
11%
Ovary
6%
Bone Marrow
3%
Gene Interaction Network
Click a node to explore
PDLIM1STK35ESR1ACTN4ACTN1ACTN2PDLIM5
PROTEIN STRUCTURE
Preparing viewer…
PDB2PKT · 1.50 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.07LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.73 [0.51–1.07]
RankingsWhere PDLIM1 stands among ~20K protein-coding genes
  • #3,890of 20,598
    Most Researched121 · top quartile
  • #10,837of 17,882
    Most Constrained (LOEUF)1.07
Genes detectedPDLIM1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Autophagy: a multifaceted player in the fate of sperm.
PMID: 34967891
Hum Reprod Update · 2022
1.00
2
The constructive and destructive impact of autophagy on both genders' reproducibility, a comprehensive review.
PMID: 37505071
Autophagy · 2023
0.90
3
PDLIM1 Inhibits Tumor Metastasis Through Activating Hippo Signaling in Hepatocellular Carcinoma.
PMID: 31509262
Hepatology · 2020
0.80
4
PDLIM1: Structure, function and implication in cancer.
PMID: 34396044
Cell Stress · 2021
0.70
5
PDLIM1 suppresses retinal neovascularization by regulating the β-catenin pathway.
PMID: 40116209
FASEB J · 2025
0.60