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25 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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POLR2C
RNA polymerase II subunit C
Chromosome 16 · 16q21
NCBI Gene: 5432Ensembl: ENSG00000102978.14HGNC: HGNC:9189UniProt: P19387
229PubMed Papers
20Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transcription elongation by RNA polymerase IIRNA polymerase II, core complexprotein bindingnucleoplasmHIV infectionacrocephalosyndactylyinfluenzadengue disease
✦AI Summary

POLR2C encodes RNA polymerase II subunit C (RPB3), a core component of RNA polymerase II that catalyzes DNA-directed synthesis of mRNA precursors and non-coding RNAs 1. As a structural subunit of the Pol II core complex, POLR2C functions in transcription initiation, elongation, and regulation at Pol II promoters 2. Clinically, POLR2C mutations associate with multiple disease phenotypes. Biallelic variants cause congenital sensorineural hearing loss and male infertility, with a missense mutation (p.Val182Ala) identified in an Iranian family showing prelingual hearing loss and decreased sperm motility 3. Heterozygous nonsense mutations in POLR2C are implicated in primary ovarian insufficiency (POI), with reduced POLR2C expression correlating with impaired cell proliferation 4. Additionally, POLR2C is classified among metabolic function genes associated with nonsyndromic POI 5. Beyond reproductive dysfunction, emerging evidence suggests POLR2C relevance in cancer and neurological disease. POLR2C was identified as a hub gene and prognostic marker in breast cancer, particularly in pyrimidine metabolism pathways, with potential therapeutic targeting combined with immunotherapy 6. In geriatric insomnia, POLR2C emerged as a key molecular signature gene linked to immune processes and nucleocytoplasmic transport 2. Finally, POLR2C-carrying extrachromosomal circular DNA associates with large-artery atherosclerotic stroke risk 7.

Sources cited
1
POLR2C (Pol II subunit C) interacts with eEF1Bγ protein and functions in transcription and translation regulation
PMID: 27639846
2
Biallelic missense variant in POLR2C causes congenital sensorineural hearing loss and male infertility
PMID: 36576366
3
Heterozygous nonsense mutation in POLR2C identified in POI families; decreased POLR2C expression impairs cell proliferation
PMID: 29367954
4
POLR2C classified among metabolic function genes associated with nonsyndromic primary ovarian insufficiency
PMID: 34794894
5
POLR2C identified as hub gene and prognostic marker in breast cancer with therapeutic potential
PMID: 40551112
6
POLR2C identified as core molecular signature gene in geriatric insomnia linked to immune processes
PMID: 41289970
7
POLR2C-carrying extrachromosomal circular DNA significantly associated with large-artery atherosclerotic stroke
PMID: 38506071
Disease Associationsⓘ20
HIV infectionOpen Targets
0.60Moderate
acrocephalosyndactylyOpen Targets
0.37Weak
dengue diseaseOpen Targets
0.37Weak
influenzaOpen Targets
0.37Weak
coronary atherosclerosisOpen Targets
0.34Weak
genetic non-acquired premature ovarian failureOpen Targets
0.32Weak
neurodegenerative diseaseOpen Targets
0.26Weak
primary ovarian insufficiencyOpen Targets
0.18Weak
deafnessOpen Targets
0.11Weak
infertilityOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.07Suggestive
ArthropathyOpen Targets
0.04Suggestive
cancerOpen Targets
0.03Suggestive
systemic lupus erythematosusOpen Targets
0.02Suggestive
psoriasis vulgarisOpen Targets
0.01Suggestive
male infertilityOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.01Suggestive
osteosarcomaOpen Targets
0.01Suggestive
Pathogenic Variants2
NM_032940.3(POLR2C):c.544G>T (p.Val182Leu)Likely pathogenic
Genetic non-acquired premature ovarian failure
☆☆☆☆2019→ Residue 182
NM_032940.3(POLR2C):c.77C>G (p.Thr26Ser)Likely pathogenic
Genetic non-acquired premature ovarian failure
☆☆☆☆2019→ Residue 26
View on ClinVar ↗
Related Genes
SUPT5HProtein interaction100%INTS6Protein interaction100%INTS5Protein interaction100%CTR9Protein interaction100%RTF1Protein interaction100%SUPT6HProtein interaction100%
Tissue Expression6 tissues
Heart
100%
Brain
96%
Ovary
90%
Lung
84%
Liver
82%
Bone Marrow
67%
Gene Interaction Network
Click a node to explore
POLR2CSUPT5HINTS6INTS5CTR9RTF1SUPT6H
PROTEIN STRUCTURE
Preparing viewer…
PDB9EHZ · 2.60 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.09LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.79 [0.58–1.09]
RankingsWhere POLR2C stands among ~20K protein-coding genes
  • #1,764of 20,598
    Most Researched229 · top 10%
  • #4,232of 5,498
    Most Pathogenic Variants2
  • #11,080of 17,882
    Most Constrained (LOEUF)1.09
Genes detectedPOLR2C
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Genetics of ovarian insufficiency and defects of folliculogenesis.
PMID: 34794894
Best Pract Res Clin Endocrinol Metab · 2022
1.00
2
A pyrimidine metabolism-related gene signature for prognosis prediction and immune microenvironment description of breast cancer.
PMID: 40551112
J Transl Med · 2025
0.90
3
Genetics of Primary Ovarian Insufficiency in the Next-Generation Sequencing Era.
PMID: 32099950
J Endocr Soc · 2020
0.88
4
POLR2C, HIF1A, CD4, and CREB1 as the identified key regulators in geriatric insomnia: A comprehensive approach using systems biology and machine learning methods.
PMID: 41289970
Comput Biol Chem · 2026
0.80
5
A biallelic variant in POLR2C is associated with congenital hearing loss and male infertility: Case report.
PMID: 36576366
Eur J Clin Invest · 2023
0.70