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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
POU4F1
POU class 4 homeobox 1
Chromosome 13 Β· 13q31.1
NCBI Gene: 5457Ensembl: ENSG00000152192.8HGNC: HGNC:9218UniProt: Q01851
45PubMed Papers
21Diseases
0Drugs
8Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
sequence-specific double-stranded DNA bindingprotein bindingDNA-binding transcription factor activity, RNA polymerase II-specificDNA-binding transcription repressor activity, RNA polymerase II-specificataxia, intention tremor, and hypotonia syndrome, childhood-onsetneurodegenerative diseaseenthesopathyNon-progressive cerebellar ataxia with intellectual disability
✦AI Summary

POU4F1 (POU class 4 homeobox 1) is a transcription factor that functions as both an activator and repressor of RNA polymerase II-dependent gene expression 1. While classically characterized as a neuronal development regulator involved in trigeminal nerve and peripheral nervous system neuron development [GO annotations], recent evidence reveals unexpected roles in diverse pathological contexts. Mechanistically, POU4F1 acts as a Smad3 target gene that regulates macrophage-myofibroblast transition by controlling fibrogenic gene networks downstream of TGF-Ξ²1/Smad3 signaling 2. In cancer, POU4F1 directly binds CDK2 and CCND1 promoters to promote G1/S transition in basal-like breast cancer 1, while in melanoma it enhances glycolysis via METTL1-mediated m7G methylation of PKM2, promoting anti-PD-1 resistance 3. POU4F1 also functions as a transcription factor for STAT3, facilitating glioma cell pyroptosis when downregulated 4. Disease relevance extends beyond its known association with childhood-onset ataxia, intention tremor, and hypotonia syndrome to include renal fibrosis, breast cancer malignancy, melanoma immunotherapy resistance, and glioma progression. In Hirschsprung disease, USP46-stabilized POU4F1 promotes neural cell migration through HPSE-mediated extracellular matrix remodeling 5. The POU4F1 locus is also dysregulated in t(8;21) acute myeloid leukemia 6. However, POU4F1 polymorphisms show no association with normal-tension glaucoma susceptibility 7, suggesting disease-context specificity.

Sources cited
1
POU4F1 is a Smad3 target gene and key downstream regulator of macrophage-myofibroblast transition in renal fibrosis
PMID: 32788346
2
POU4F1 promotes basal-like breast cancer through direct binding at CDK2 and CCND1 promoters to regulate G1/S transition
PMID: 38491910
3
POU4F1 drives anti-PD-1 resistance in melanoma by enhancing glycolysis via METTL1-mediated m7G methylation of PKM2
PMID: 41025963
4
POU4F1 acts as a transcription factor of STAT3 and regulates glioma cell pyroptosis
PMID: 37962640
5
USP46 stabilizes POU4F1 via deubiquitination, promoting POU4F1 binding to HPSE promoter and neural cell migration in Hirschsprung disease
PMID: 40251903
6
AML1/ETO promotes POU4F1/BRN3A expression in t(8;21) acute myeloid leukemia and blocks Brn3a-induced myeloid differentiation
PMID: 20460523
7
POU4F1 polymorphism rs9601092 shows no significant association with normal-tension glaucoma development
PMID: 32597291
8
POU4F1 expression is altered in monocrotophos-induced neurotoxicity in mesenchymal stem cells
PMID: 31786755
Disease Associationsβ“˜21
ataxia, intention tremor, and hypotonia syndrome, childhood-onsetOpen Targets
0.71Strong
neurodegenerative diseaseOpen Targets
0.53Moderate
enthesopathyOpen Targets
0.41Moderate
Non-progressive cerebellar ataxia with intellectual disabilityOpen Targets
0.40Weak
ovarian neoplasmOpen Targets
0.33Weak
smoking initiationOpen Targets
0.23Weak
cholelithiasisOpen Targets
0.20Weak
Abnormality of the skeletal systemOpen Targets
0.19Weak
attention deficit hyperactivity disorderOpen Targets
0.16Weak
Abnormal urine outputOpen Targets
0.15Weak
genetic disorderOpen Targets
0.15Weak
cervical carcinomaOpen Targets
0.14Weak
enuresisOpen Targets
0.13Weak
Abruptio PlacentaeOpen Targets
0.13Weak
ocular hypotensionOpen Targets
0.13Weak
joint diseaseOpen Targets
0.13Weak
cerebellar dysfunction with variable cognitive and behavioral abnormalitiesOpen Targets
0.12Weak
melanomaOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Suggestive
breast cancerOpen Targets
0.08Suggestive
Ataxia, intention tremor, and hypotonia syndrome, childhood-onsetUniProt
Pathogenic Variants8
NM_006237.4(POU4F1):c.106_113del (p.Cys36fs)Likely pathogenic
Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜…β˜†β˜†β˜†2024β†’ Residue 36
NM_006237.4(POU4F1):c.101_104dup (p.Cys36fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 36
NM_006237.4(POU4F1):c.115dup (p.Thr39fs)Pathogenic
Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜…β˜†β˜†β˜†2023β†’ Residue 39
NM_006237.4(POU4F1):c.124-9C>ALikely pathogenic
Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜†β˜†β˜†β˜†2023
NM_006237.4(POU4F1):c.917A>G (p.Gln306Arg)Pathogenic
not provided|Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜†β˜†β˜†β˜†2021β†’ Residue 306
NM_006237.4(POU4F1):c.158_161dup (p.Leu55fs)Pathogenic
not provided|Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜†β˜†β˜†β˜†2021β†’ Residue 55
NM_006237.4(POU4F1):c.283_290del (p.Thr95fs)Pathogenic
Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜†β˜†β˜†β˜†2021β†’ Residue 95
NM_006237.4(POU4F1):c.271_281del (p.Thr91fs)Pathogenic
Ataxia, intention tremor, and hypotonia syndrome, childhood-onset
β˜†β˜†β˜†β˜†2021β†’ Residue 91
View on ClinVar β†—
Related Genes
NEUROG2Protein interaction90%RIT2Protein interaction83%LHX9Protein interaction81%ASCL1Protein interaction76%ATOH1Protein interaction76%NEUROG1Protein interaction76%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
24%
Lung
0%
Liver
0%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
POU4F1NEUROG2RIT2LHX9ASCL1ATOH1NEUROG1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q01851
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.71LoF Tolerant
pLIβ“˜
0.63Intermediate
Observed/Expected LoF0.34 [0.18–0.71]
RankingsWhere POU4F1 stands among ~20K protein-coding genes
  • #9,501of 20,598
    Most Researched45
  • #3,098of 5,498
    Most Pathogenic Variants8
  • #5,479of 17,882
    Most Constrained (LOEUF)0.71
Genes detectedPOU4F1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Neural transcription factor Pou4f1 promotes renal fibrosis via macrophage-myofibroblast transition.
PMID: 32788346
Proc Natl Acad Sci U S A Β· 2020
1.00
2
Activation of Bivalent Gene POU4F1 Promotes and Maintains Basal-like Breast Cancer.
PMID: 38491910
Adv Sci (Weinh) Β· 2024
0.90
3
POU4F1 Promotes the Primary Resistance of Melanoma to Anti-PD-1 Therapy by Regulating Glycolysis Through METTL1-Mediated m7G Methylation of PKM2.
PMID: 41025963
Mol Carcinog Β· 2025
0.80
4
Xihuang pill facilitates glioma cell pyroptosis via the POU4F1/STAT3 axis.
PMID: 37962640
Funct Integr Genomics Β· 2023
0.70
5
Integrated quantitative proteomics and phosphoproteomics analysis reveals USP46-POU4F1-HPSE signaling axis in the pathogenesis of Hirschsprung disease.
PMID: 40251903
Acta Biochim Biophys Sin (Shanghai) Β· 2025
0.60