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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PPP1R3B
protein phosphatase 1 regulatory subunit 3B
Chromosome 8 · 8p23.1
NCBI Gene: 79660Ensembl: ENSG00000173281.5HGNC: HGNC:14942UniProt: Q86XI6
47PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnegative regulation of glycogen catabolic processregulation of glycogen biosynthetic processprotein phosphatase 1 bindingneurodegenerative diseaseInsulin resistanceosteoarthritisHeadache
✦AI Summary

PPP1R3B encodes a regulatory subunit that targets protein phosphatase 1 (PP1) to glycogen, serving as a critical regulator of hepatic glycogen metabolism and energy homeostasis 1. The protein facilitates PP1's interaction with glycogen metabolic enzymes, enhancing glycogen synthase activation while suppressing glycogen phosphorylase activity, thereby promoting glycogen synthesis over breakdown 1. mTORC1 controls postprandial hepatic glycogen synthesis by promoting feeding-dependent induction of PPP1R3B through FOXO1-mediated transcriptional regulation 1. Genetic variants affecting PPP1R3B expression have broad metabolic implications: increased expression is associated with lower liver fat and decreased plasma lipids, while loss-of-function variants correlate with increased liver fat and elevated plasma lipids 2. PPP1R3B variants influence whether hepatic energy is stored as glycogen or triglycerides, with the protein serving as a crucial metabolic switch beyond glycogen synthesis 2. Genome-wide association studies have identified PPP1R3B variants associated with blood lipid levels and cardiovascular disease risk 34. The gene shows pregnancy-specific effects on glucose homeostasis, with variants demonstrating greater influence during pregnancy compared to postpartum periods 5. Additionally, PPP1R3B promotes anti-inflammatory M2 macrophage polarization through glycogen metabolic reprogramming, potentially suppressing atherosclerosis progression 6.

Sources cited
1
mTORC1 controls postprandial hepatic glycogen synthesis via Ppp1r3b through FOXO1-mediated transcriptional regulation
PMID: 38290087
2
PPP1R3B variants influence whether hepatic energy is stored as glycogen or triglycerides, affecting liver fat and plasma lipids
PMID: 40378221
3
PPP1R3B variants are associated with plasma lipid levels and coronary artery disease risk
PMID: 20686565
4
PPP1R3B polymorphisms are associated with blood lipid and C-reactive protein levels in Chinese populations
PMID: 23343124
5
PPP1R3B variants show pregnancy-specific effects on glucose homeostasis
PMID: 39180581
6
PPP1R3B promotes anti-inflammatory M2 macrophage polarization and suppresses atherosclerosis through glycogen metabolic reprogramming
PMID: 40984828
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.51Moderate
Insulin resistanceOpen Targets
0.45Moderate
osteoarthritisOpen Targets
0.42Moderate
HeadacheOpen Targets
0.41Moderate
osteoarthritis, hipOpen Targets
0.34Weak
breast cancerOpen Targets
0.33Weak
hypertensionOpen Targets
0.32Weak
PainOpen Targets
0.32Weak
mathematical abilityOpen Targets
0.32Weak
type 2 diabetes mellitusOpen Targets
0.31Weak
asthmaOpen Targets
0.31Weak
liver diseaseOpen Targets
0.30Weak
essential hypertensionOpen Targets
0.30Weak
HypercholesterolemiaOpen Targets
0.30Weak
metabolic diseaseOpen Targets
0.28Weak
Alzheimer diseaseOpen Targets
0.28Weak
cutaneous lupus erythematosusOpen Targets
0.27Weak
osteoarthritis, kneeOpen Targets
0.27Weak
Parkinson diseaseOpen Targets
0.27Weak
multiple sclerosisOpen Targets
0.27Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CLDN23Protein interaction97%PPP1R3EProtein interaction96%GYS1Protein interaction93%GYS2Protein interaction93%PPP1CBProtein interaction93%PPP1CCProtein interaction93%
Tissue Expression6 tissues
Liver
100%
Heart
82%
Lung
28%
Ovary
12%
Bone Marrow
10%
Brain
5%
Gene Interaction Network
Click a node to explore
PPP1R3BCLDN23PPP1R3EGYS1GYS2PPP1CBPPP1CC
PROTEIN STRUCTURE
Preparing viewer…
PDB5ZT0 · 3.32 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.91LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.56 [0.36–0.91]
RankingsWhere PPP1R3B stands among ~20K protein-coding genes
  • #9,259of 20,598
    Most Researched47
  • #8,260of 17,882
    Most Constrained (LOEUF)0.91
Genes detectedPPP1R3B
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Biological, clinical and population relevance of 95 loci for blood lipids.
PMID: 20686565
Nature · 2010
1.00
2
PMID: 40378221
Sci Adv · 2025
0.90
3
mTORC1 controls murine postprandial hepatic glycogen synthesis via Ppp1r3b.
PMID: 38290087
J Clin Invest · 2024
0.80
4
PPP1R3B Suppresses Atherosclerosis by Promoting the M2 Polarization of Macrophages Through Glycogen Metabolic Reprogramming.
PMID: 40984828
Adv Sci (Weinh) · 2025
0.70
5
Examination of PPP1R3B as a candidate gene for the type 2 diabetes and MODY loci on chromosome 8p23.
PMID: 16907705
Ann Hum Genet · 2006
0.60