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GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PRKAR2A
protein kinase cAMP-dependent type II regulatory subunit alpha
Chromosome 3 · 3p21.31
NCBI Gene: 5576Ensembl: ENSG00000114302.17HGNC: HGNC:9391UniProt: A0A024R2W3
234PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
focal adhesionmembraneplasma membrane raftprotein-containing complexneurodegenerative diseaseAbnormality of the skeletal systemneuroinflammatory disorderprostate carcinoma
✦AI Summary

PRKAR2A encodes the regulatory subunit IIα (RIIα) of cAMP-dependent protein kinase (PKA), a critical component of the PKA holoenzyme that regulates cAMP signaling 1. RIIα is a type II regulatory chain that mediates membrane association through binding to anchoring proteins and determines PKA subcellular localization, distinguishing it functionally from other PKA subunits 2. In uterine smooth muscle, PRKAR2A expression is dynamically regulated during pregnancy and labor, with epigenetic control via histone deacetylase activity at GC-rich promoter elements, suggesting a role in maintaining uterine quiescence 1. Loss of PRKAR2A predisposes to hematopoietic malignancies in mice, particularly histiocytic sarcomas and diffuse large B cell lymphomas 3. In fibrolamellar hepatocellular carcinoma, cooperative loss of BAP1 and PRKAR2A causes hepatocyte transdifferentiation into ductal/progenitor-like cells, highlighting its tumor suppressor function 4. PRKAR2A-derived circular RNAs promote colitis-associated colorectal cancer progression through Wnt signaling and serve as biomarkers distinguishing cancer patients 5. In the medial habenula, PRKAR2A deletion decreases hedonic eating and increases exercise motivation by reducing dendritic PKA activity 2. PRKAR2A-AS1 long non-coding RNA is altered in autism spectrum disorder, potentially serving as a diagnostic marker 6. Methylation variations at PRKAR2A are inversely associated with chr3 kidney disease risk 7.

Sources cited
1
PRKAR2A expression is dynamically regulated in uterine smooth muscle and epigenetically controlled by histone deacetylase activity
PMID: 19818097
2
PRKAR2A deficiency predisposes mice to hematopoietic neoplasms including histiocytic sarcomas and diffuse large B cell lymphomas
PMID: 26608815
3
Cooperative loss of BAP1 and PRKAR2A causes hepatocyte transdifferentiation in fibrolamellar carcinoma
PMID: 37137901
4
PRKAR2A-derived circular RNAs promote colitis-associated colorectal cancer and serve as disease markers
PMID: 35184406
5
PRKAR2A loss in medial habenula reduces hedonic eating and increases exercise motivation through decreased PKA signaling
PMID: 33141766
6
PRKAR2A-AS1 long non-coding RNA is altered in autism spectrum disorder and may serve as a diagnostic marker
PMID: 33587235
7
PRKAR2A methylation is inversely associated with chronic kidney disease risk
PMID: 40361162
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.34Weak
Abnormality of the skeletal systemOpen Targets
0.27Weak
neuroinflammatory disorderOpen Targets
0.27Weak
prostate carcinomaOpen Targets
0.24Weak
dysthymic disorderOpen Targets
0.11Weak
health study participationOpen Targets
0.11Weak
major depressive disorderOpen Targets
0.09Suggestive
colitisOpen Targets
0.08Suggestive
colorectal cancerOpen Targets
0.08Suggestive
smoking cessationOpen Targets
0.07Suggestive
rheumatoid arthritisOpen Targets
0.05Suggestive
alcohol drinkingOpen Targets
0.05Suggestive
nephrolithiasisOpen Targets
0.04Suggestive
hypertensionOpen Targets
0.04Suggestive
essential hypertensionOpen Targets
0.04Suggestive
temporomandibular joint disorderOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.03Suggestive
metabolic syndromeOpen Targets
0.03Suggestive
depressive disorderOpen Targets
0.03Suggestive
hematopoietic and lymphoid cell neoplasmOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
AKAP4Protein interaction96%AKAP7Protein interaction96%PDZK1Protein interaction96%AKAP10Protein interaction96%AKAP14Protein interaction96%RUNX1T1Protein interaction94%
Tissue Expression6 tissues
Heart
100%
Brain
66%
Liver
64%
Lung
61%
Bone Marrow
49%
Ovary
47%
Gene Interaction Network
Click a node to explore
PRKAR2AAKAP4AKAP7PDZK1AKAP10AKAP14RUNX1T1
PROTEIN STRUCTURE
Preparing viewer…
PDB2IZX · 1.30 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.75LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.50 [0.35–0.75]
RankingsWhere PRKAR2A stands among ~20K protein-coding genes
  • #1,704of 20,598
    Most Researched234 · top 10%
  • #5,882of 17,882
    Most Constrained (LOEUF)0.75
Genes detectedPRKAR2A
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Epigenetic modulation of the protein kinase A RIIα (PRKAR2A) gene by histone deacetylases 1 and 2 in human smooth muscle cells.
PMID: 19818097
J Cell Mol Med · 2011
1.00
2
Hematopoietic neoplasms in Prkar2a-deficient mice.
PMID: 26608815
J Exp Clin Cancer Res · 2015
0.90
3
Organoid models of fibrolamellar carcinoma mutations reveal hepatocyte transdifferentiation through cooperative BAP1 and PRKAR2A loss.
PMID: 37137901
Nat Commun · 2023
0.80
4
PRKAR2A-derived circular RNAs promote the malignant transformation of colitis and distinguish patients with colitis-associated colorectal cancer.
PMID: 35184406
Clin Transl Med · 2022
0.70
5
Multiomic prioritisation of risk genes for anorexia nervosa.
PMID: 36803885
Psychol Med · 2023
0.60