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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PTPN21
protein tyrosine phosphatase non-receptor type 21
Chromosome 14 · 14q31.3
NCBI Gene: 11099Ensembl: ENSG00000070778.14HGNC: HGNC:9651UniProt: Q16825
38PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingprotein tyrosine phosphatase activitypositive regulation of hippo signalingprotein dephosphorylationmuscular diseaseAlzheimer diseaserespiratory tract infectious disorderprostate cancer
✦AI Summary

PTPN21 is a cytosolic non-receptor protein tyrosine phosphatase that regulates cellular processes through multiple signaling pathways and protein-protein interactions. As a phosphatase, PTPN21 dephosphorylates target proteins including the receptor tyrosine kinase ErbB4, thereby modulating downstream signaling cascades 1. Structurally, PTPN21 contains a FERM domain that serves as a protein-binding module, facilitating interactions with regulatory proteins such as KIF1C and Hook3 to relieve motor autoinhibition and activate intracellular transport 23. In disease contexts, PTPN21 exhibits context-dependent roles. Loss of PTPN21 disrupts mitochondrial homeostasis in lung epithelial cells, exacerbating experimental pulmonary fibrosis through increased reactive oxygen species and impaired autophagy, subsequently promoting fibroblast activation 4. Conversely, PTPN21 demonstrates pro-tumoral properties in cervical cancer, where it interacts with HPV18 E7 oncoprotein without undergoing proteasomal degradation, promoting cell migration and invasion 5. In acute lymphoblastic leukemia, the PTPN21-CDSlong isoform inhibits NK cell-mediated killing by downregulating HLA-I molecules 6. Therapeutically, PTPN21 shows neuroprotective effects in ischemic injury through ERK1/2-dependent cdk5 activation 7, and modulates bone marrow mesenchymal stem cell differentiation and immunosuppressive capacity 8.

Sources cited
1
Loss of PTPN21 disrupts mitochondrial metabolic homeostasis in epithelial cells and aggravates experimental pulmonary fibrosis
PMID: 39633451
2
PTPN21 interacts with HPV18 E7 oncoprotein, is not degraded, and promotes cervical cancer cell migration and invasion
PMID: 33431714
3
PTPN21 FERM domain relieves KIF1C motor autoinhibition and activates intracellular transport
PMID: 31217419
4
PTPN21 FERM domain has canonical folding and mediates protein-protein interactions
PMID: 38940939
5
PTPN21 dephosphorylates ErbB4 and promotes neuronal survival and neuritic elongation via ErbB4/NRG3 signaling
PMID: 25681686
6
PTPN21-CDSlong isoform inhibits NK cell-mediated killing in acute lymphoblastic leukemia by regulating HLA-I expression
PMID: 31898344
7
PTPN21 overexpression promotes osteogenic and adipogenic differentiation of bone marrow-derived mesenchymal stem cells
PMID: 31885609
8
PTPN21 protects neurons against ischemic injury by activating cdk5 through ERK1/2 signaling pathway
PMID: 28843827
Disease Associationsⓘ20
muscular diseaseOpen Targets
0.34Weak
Alzheimer diseaseOpen Targets
0.32Weak
respiratory tract infectious disorderOpen Targets
0.27Weak
prostate cancerOpen Targets
0.11Weak
Familial prostate cancerOpen Targets
0.11Weak
myoepithelial tumorOpen Targets
0.11Weak
acute lymphoblastic leukemiaOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.08Suggestive
amyotrophic lateral sclerosisOpen Targets
0.05Suggestive
pulmonary fibrosisOpen Targets
0.05Suggestive
placenta praeviaOpen Targets
0.05Suggestive
lower urinary tract calculusOpen Targets
0.04Suggestive
bladder transitional cell carcinomaOpen Targets
0.04Suggestive
non-small cell lung carcinomaOpen Targets
0.03Suggestive
cervical cancerOpen Targets
0.02Suggestive
gliomaOpen Targets
0.02Suggestive
lung adenocarcinomaOpen Targets
0.02Suggestive
ovarian carcinomaOpen Targets
0.02Suggestive
urinary bladder carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
KIF1AProtein interaction93%KIF1CProtein interaction93%PTSProtein interaction87%SRCProtein interaction85%PARD6BProtein interaction81%WWC1Protein interaction72%
Tissue Expression6 tissues
Heart
100%
Ovary
47%
Lung
30%
Liver
21%
Brain
10%
Bone Marrow
1%
Gene Interaction Network
Click a node to explore
PTPN21KIF1AKIF1CPTSSRCPARD6BWWC1
PROTEIN STRUCTURE
Preparing viewer…
PDB8GVV · 1.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.73LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.59 [0.48–0.73]
RankingsWhere PTPN21 stands among ~20K protein-coding genes
  • #10,532of 20,598
    Most Researched38
  • #5,663of 17,882
    Most Constrained (LOEUF)0.73
Genes detectedPTPN21
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Loss of PTPN21 disrupted mitochondrial metabolic homeostasis and aggravated experimental pulmonary fibrosis.
PMID: 39633451
Respir Res · 2024
1.00
2
Molecular Analysis of the Interaction between Human PTPN21 and the Oncoprotein E7 from Human Papillomavirus Genotype 18.
PMID: 33431714
Mol Cells · 2021
0.90
3
PTPN21 and Hook3 relieve KIF1C autoinhibition and activate intracellular transport.
PMID: 31217419
Nat Commun · 2019
0.80
4
Structural analysis of the FERM domain of human protein tyrosine phosphatase non-receptor type 21.
PMID: 38940939
Acta Crystallogr F Struct Biol Commun · 2024
0.70
5
PTPN21 exerts pro-neuronal survival and neuritic elongation via ErbB4/NRG3 signaling.
PMID: 25681686
Int J Biochem Cell Biol · 2015
0.60