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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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RAET1E
retinoic acid early transcript 1E
Chromosome 6 · 6q25.1
NCBI Gene: 135250Ensembl: ENSG00000164520.12HGNC: HGNC:16793UniProt: Q8TD07
29PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnatural killer cell lectin-like receptor bindingnatural killer cell mediated cytotoxicitypositive regulation of natural killer cell mediated cytotoxicitymyeloid sarcomanasopharyngeal carcinomaneoplasmesophageal adenocarcinoma
✦AI Summary

RAET1E (retinoic acid early transcript 1E) encodes ULBP4, a transmembrane glycoprotein that functions as a ligand for the NKG2D activating receptor on natural killer (NK) cells and T cells 12. The protein contains α1 and α2 domains but lacks the α3 domain and does not associate with β2-microglobulin 2. RAET1E binding to NKG2D mediates NK cell cytotoxicity against infected, tumorigenic, and damaged cells, playing a crucial role in innate immunity 13. The gene exhibits significant allelic polymorphism, with at least 15 known alleles showing variations in promoter regions, exons, and 3' UTR sequences that may affect expression levels through altered transcription factor binding sites and microRNA interactions 14. Polymorphism patterns vary among ethnic populations, with different allele frequencies observed in Thai and South American Indian populations 253. RAET1E shows strong linkage disequilibrium with other RAET1 genes, particularly RAET1G, forming conserved haplotypes 5. The gene has clinical relevance as a prognostic marker in lung adenocarcinoma and is associated with immune cell infiltration patterns in various diseases including Alzheimer's disease 67.

Sources cited
1
RAET1E encodes NKG2D ligand involved in NK cell cytotoxicity and shows promoter polymorphisms affecting transcription factor binding
PMID: 26519211
2
RAET1E encodes ULBP4 transmembrane glycoprotein with α1/α2 domains, lacks β2-microglobulin association, shows ethnic variation
PMID: 19688209
3
RAET1E exhibits polymorphisms in exon 4 and 3' UTR that may affect microRNA binding and expression
PMID: 38575368
4
RAET1E shows strong linkage disequilibrium with RAET1G forming conserved haplotypes in Thai population
PMID: 20522206
5
RAET1E mediates NK cell cytolysis through NKG2D engagement and shows population-specific polymorphism patterns
PMID: 23416094
6
RAET1E serves as prognostic marker in lung adenocarcinoma risk scoring model
PMID: 35504892
7
RAET1E identified as key gene associated with Alzheimer's disease and M1 macrophage infiltration
PMID: 34975305
Disease Associationsⓘ20
myeloid sarcomaOpen Targets
0.08Suggestive
nasopharyngeal carcinomaOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.05Suggestive
esophageal adenocarcinomaOpen Targets
0.03Suggestive
Alzheimer diseaseOpen Targets
0.02Suggestive
atherosclerosisOpen Targets
0.02Suggestive
coronary artery diseaseOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
acute myeloid leukemiaOpen Targets
0.01Suggestive
cervical cancerOpen Targets
0.01Suggestive
ovarian cancerOpen Targets
0.01Suggestive
cervical carcinomaOpen Targets
0.01Suggestive
papillary thyroid carcinomaOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.01Suggestive
Colon Sessile Serrated Adenoma/PolypOpen Targets
0.01Suggestive
pneumococcal meningitisOpen Targets
0.01Suggestive
multiple sclerosisOpen Targets
0.01Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.01Suggestive
adenocarcinomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HCSTProtein interaction100%KLRC4-KLRK1Protein interaction100%CD8AProtein interaction95%RAET1LProtein interaction82%RAET1GProtein interaction76%KLRK1Protein interaction69%
Tissue Expression6 tissues
Brain
100%
Lung
89%
Heart
68%
Ovary
68%
Liver
37%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
RAET1EHCSTKLRC4-KLRK1CD8ARAET1LRAET1GKLRK1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8TD07
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.61LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.15 [0.83–1.61]
RankingsWhere RAET1E stands among ~20K protein-coding genes
  • #12,219of 20,598
    Most Researched29
  • #15,718of 17,882
    Most Constrained (LOEUF)1.61
Genes detectedRAET1E
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Characterization of 5' promoter and exon 1-3 polymorphism of the RAET1E gene.
PMID: 26519211
Hum Immunol · 2016
1.00
2
Characterisation of RAET1E/ULBP4 exon 4 and 3' untranslated region genetic architecture reveals further diversity and allelic polymorphism.
PMID: 38575368
HLA · 2024
0.90
3
Polymorphisms of NKG2D ligands: diverse RAET1/ULBP genes in northeastern Thais.
PMID: 19688209
Immunogenetics · 2009
0.80
4
Immunoprognostic model of lung adenocarcinoma and screening of sensitive drugs.
PMID: 35504892
Sci Rep · 2022
0.70
5
Linkage disequilibrium of polymorphic RAET1 genes in Thais.
PMID: 20522206
Tissue Antigens · 2010
0.60