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6 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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REXO1
RNA exonuclease 1 homolog
Chromosome 19 · 19p13.3
NCBI Gene: 57455Ensembl: ENSG00000079313.16HGNC: HGNC:24616UniProt: Q8N1G1
23PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nuclear bodynucleoplasmrRNA 3'-end processingnucleushypertensioncardiovascular diseaseovarian dysfunctionAlzheimer disease
✦AI Summary

REXO1 (RNA exonuclease 1 homolog) is a nuclear protein with exonuclease activity involved in rRNA 3'-end processing 1. Located in nuclear bodies and the nucleoplasm, REXO1 shares structural similarity with transcription elongation factors but has no detectable effect on transcription elongation in vitro 1. REXO1 was originally identified as Elongin A-binding protein 1 (EloA-BP1) through its interaction with the Elongin complex, suggesting potential regulatory roles in transcription that may manifest in vivo despite lacking measurable in vitro activity 1. Clinically, REXO1 has emerged as a biomarker for cancer risk. Increased DNA methylation in genomic regions associated with REXO1 in prospectively collected blood samples predicted breast cancer development up to 15 years before clinical diagnosis, with a machine learning classifier achieving 76.5% accuracy in case-control prediction 2. Additionally, REXO1L1 (a homologous gene cluster) copy number variation has been associated with potential susceptibility to hepatitis C virus infection, though this relationship requires further investigation 3. These findings suggest REXO1 participates in cancer-associated epigenetic changes detectable in peripheral blood, offering potential applications for early risk stratification and personalized cancer prevention strategies.

Sources cited
1
REXO1 (EloA-BP1) contains an exonuclease homology domain, localizes to the nucleus, binds Elongin A, and has no detectable effect on transcription elongation in vitro
PMID: 12943681
2
Increased DNA methylation in REXO1 genomic regions in blood samples predicted breast cancer development up to 15 years before diagnosis with 76.5% classifier accuracy
PMID: 37309009
3
REXO1L1 copy number variation exists as tandem repeats, the gene product is a marker of hepatitis C virus infection, and potential associations with HCV susceptibility remain uninvestigated
PMID: 24045839
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
hypertensionOpen Targets
0.38Weak
cardiovascular diseaseOpen Targets
0.30Weak
ovarian dysfunctionOpen Targets
0.28Weak
Alzheimer diseaseOpen Targets
0.23Weak
Increased blood pressureOpen Targets
0.19Weak
Abnormality of the skeletal systemOpen Targets
0.15Weak
mathematical abilityOpen Targets
0.13Weak
essential hypertensionOpen Targets
0.12Weak
breast cancerOpen Targets
0.10Suggestive
type 2 diabetes mellitusOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
neuroblastomaOpen Targets
0.07Suggestive
breast neoplasmOpen Targets
0.05Suggestive
hepatitis B virus infectionOpen Targets
0.05Suggestive
prostate cancerOpen Targets
0.05Suggestive
cervical cancerOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.05Suggestive
triple-negative breast cancerOpen Targets
0.04Suggestive
liver and intrahepatic bile duct neoplasmOpen Targets
0.04Suggestive
Neoplasm of the liverOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ELOAProtein interaction96%REXO2Protein interaction95%REXO5Protein interaction92%SCAF1Protein interaction82%ERFProtein interaction77%TCEA1Protein interaction75%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
93%
Ovary
84%
Lung
81%
Brain
44%
Heart
25%
Gene Interaction Network
Click a node to explore
REXO1ELOAREXO2REXO5SCAF1ERFTCEA1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N1G1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.62LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.47 [0.37–0.62]
RankingsWhere REXO1 stands among ~20K protein-coding genes
  • #13,503of 20,598
    Most Researched23
  • #4,298of 17,882
    Most Constrained (LOEUF)0.62 · top quartile
Genes detectedREXO1
Sources retrieved6 papers
Response time—
📄 Sources
6▼
1
Buffy coat signatures of breast cancer risk in a prospective cohort study.
PMID: 37309009
Clin Epigenetics · 2023
1.00
2
Induction of stem cell gene expression in adult human fibroblasts without transgenes.
PMID: 19622035
Cloning Stem Cells · 2009
0.83
3
Identification of EloA-BP1, a novel Elongin A binding protein with an exonuclease homology domain.
PMID: 12943681
Biochem Biophys Res Commun · 2003
0.67
4
Expansion of a 12-kb VNTR containing the REXO1L1 gene cluster underlies the microscopically visible euchromatic variant of 8q21.2.
PMID: 24045839
Eur J Hum Genet · 2014
0.50
5
Primary involvement of NADPH oxidase 4 in hypoxia-induced generation of reactive oxygen species in adipose-derived stem cells.
PMID: 22181007
Stem Cells Dev · 2012
0.33