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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RFC3
replication factor C subunit 3
Chromosome 13 · 13q13.2
NCBI Gene: 5983Ensembl: ENSG00000133119.14HGNC: HGNC:9971UniProt: P40938
213PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
DNA RepairHub Gene
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleoplasmCtf18 RFC-like complexDNA replication factor C complexprotein bindingneurodegenerative diseaseovarian carcinomapulmonary fibrosisadolescent idiopathic scoliosis
✦AI Summary

RFC3 encodes a critical subunit of the replication factor C (RFC) complex, which functions as an ATP-dependent DNA clamp loader essential for processive DNA replication by DNA polymerases delta and epsilon 1. The RFC complex loads proliferating cell nuclear antigen (PCNA) onto primed DNA, where PCNA acts as a sliding clamp to enhance polymerase processivity 2. RFC3 contains conserved ATP-binding motifs and exhibits single-stranded DNA-stimulated ATPase activity 1. The protein is essential for cell viability, as RFC3 deletion causes DNA replication defects 2. Beyond its core replication function, RFC3 appears to have regulatory roles in cancer progression. RFC3 is significantly upregulated in multiple cancer types including diffuse large B-cell lymphoma, head and neck squamous cell carcinoma, gastric cancer, and breast cancer, where high expression correlates with poor prognosis and adverse clinical features 345. In gastric cancer, RFC3 is transcriptionally activated by the YAP1/TEAD signaling pathway 5. RFC3 frameshift mutations occur in 24-26% of microsatellite-unstable gastric and colorectal cancers, often resulting in loss of protein expression 6. Additionally, RFC3 contributes to tamoxifen resistance in ER-positive breast cancer through cell cycle regulation 7.

Sources cited
1
RFC3 encodes a subunit of replication factor C complex with ATP-dependent clamp loading activity and contains conserved ATP-binding motifs
PMID: 8302859
2
RFC complex loads PCNA onto DNA and RFC3 is essential for DNA replication and cell viability
PMID: 10794172
3
RFC3 is upregulated in diffuse large B-cell lymphoma and correlates with poor prognosis
PMID: 40980067
4
RFC3 expression is elevated in head and neck squamous cell carcinoma and associated with adverse clinical features
PMID: 37861747
5
RFC3 is upregulated in gastric cancer and transcriptionally activated by YAP1/TEAD signaling pathway
PMID: 38383698
6
RFC3 frameshift mutations occur in 24-26% of microsatellite-unstable gastric and colorectal cancers
PMID: 20573375
7
RFC3 contributes to tamoxifen resistance in ER-positive breast cancer through cell cycle regulation
PMID: 38059884
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.48Moderate
ovarian carcinomaOpen Targets
0.37Weak
pulmonary fibrosisOpen Targets
0.30Weak
adolescent idiopathic scoliosisOpen Targets
0.29Weak
high grade ovarian serous adenocarcinomaOpen Targets
0.29Weak
ovarian dysfunctionOpen Targets
0.23Weak
response to xenobiotic stimulusOpen Targets
0.21Weak
alcohol drinkingOpen Targets
0.21Weak
deficiency anemiaOpen Targets
0.20Weak
response to steroidOpen Targets
0.20Weak
corneal ulcerOpen Targets
0.20Weak
heart diseaseOpen Targets
0.20Weak
ptosisOpen Targets
0.20Weak
Abruptio PlacentaeOpen Targets
0.19Weak
hypertensionOpen Targets
0.19Weak
mixed connective tissue diseaseOpen Targets
0.19Weak
eyelid diseaseOpen Targets
0.19Weak
schizophreniaOpen Targets
0.19Weak
anaphylaxisOpen Targets
0.19Weak
esophageal diseaseOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FEN1Protein interaction100%HUS1Protein interaction100%LIG1Protein interaction100%PCNAProtein interaction100%PRIM1Protein interaction100%PRIM2Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
64%
Heart
30%
Ovary
29%
Lung
21%
Liver
15%
Gene Interaction Network
Click a node to explore
RFC3FEN1HUS1LIG1PCNAPRIM1PRIM2
PROTEIN STRUCTURE
Preparing viewer…
PDB8UMV · 2.75 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.15LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.79 [0.56–1.15]
RankingsWhere RFC3 stands among ~20K protein-coding genes
  • #1,953of 20,598
    Most Researched213 · top 10%
  • #12,019of 17,882
    Most Constrained (LOEUF)1.15
Genes detectedRFC3
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
Prognostic significance and pathogenesis of RFC3 gene expression in diffuse large B-cell lymphoma.
PMID: 40980067
PeerJ · 2025
1.00
2
RFC3 serves as a novel prognostic biomarker and target for head and neck squamous cell carcinoma.
PMID: 37861747
Clin Oral Investig · 2023
0.90
3
The Schizosaccharomyces pombe rfc3+ gene encodes a homologue of the human hRFC36 and Saccharomyces cerevisiae Rfc3 subunits of replication factor C.
PMID: 10794172
Curr Genet · 2000
0.80
4
RFC3 drives the proliferation, migration, invasion and angiogenesis of colorectal cancer cells by binding KIF14.
PMID: 38590579
Exp Ther Med · 2024
0.72
5
Triad of human cellular proteins, IRF2, FAM111A, and RFC3, restrict replication of orthopoxvirus SPI-1 host-range mutants.
PMID: 28320935
Proc Natl Acad Sci U S A · 2017
0.70