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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RNASEK
ribonuclease K
Chromosome 17 · 17p13.1
NCBI Gene: 440400Ensembl: ENSG00000219200.12HGNC: HGNC:33911UniProt: A0A0C4DH89
22PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA endonuclease activityprotein bindingreceptor-mediated endocytosisreceptor-mediated endocytosis of virus by host cellneurodegenerative diseasedengue diseasecancerisolated asymptomatic elevation of creatine phosphokinase
✦AI Summary

RNASEK (ribonuclease K) is a highly conserved transmembrane endoribonuclease with multifaceted cellular roles. Primary function: RNASEK is required for viral entry across diverse enveloped viruses including dengue, West Nile, influenza, and coronavirus (PEDV), functioning as a host factor that facilitates clathrin-mediated endocytosis by interacting with viral structural proteins and promoting internalization 12. Mechanism: RNASEK localizes to early/late endosomes and endoplasmic reticulum 3. It is a component of the V-ATPase complex and mediates lysosomal hydrolase delivery, specifically PLD3 targeting via the ESCRT-III pathway, which is essential for autophagosome degradation and cargo clearance 4. RNASEK also directly degrades circular RNAs in stress granules, preventing age-associated circRNA accumulation 5. Disease relevance: RNASEK upregulation correlates with enhanced viral replication and is a diagnostic biomarker in six cancer types (bladder, cholangiocarcinoma, esophageal, head/neck squamous cell, liver, thyroid) 6. High expression predicts favorable prognosis in pancreatic adenocarcinoma 6. In bone metastasis, RNASEK expression is upregulated via DKK1/LRP5 signaling to promote osteoclast precursor recruitment 7. Clinical significance: RNASEK represents a potential therapeutic target for antiviral and cancer interventions, with soluble receptor-based inhibition strategies showing promise in bone metastasis models 72.

Sources cited
1
RNASEK required for clathrin-mediated and clathrin-independent endocytic uptake of dengue, West Nile, Sindbis, influenza, and rhinoviruses
PMID: 26056282
2
RNASEK interacts with PEDV structural proteins (S, E, M) and facilitates virus entry through clathrin-mediated endocytosis via EPS15-clathrin complex
PMID: 39835814
3
RNASEK is a V-ATPase complex component required for lysosomal hydrolase delivery (PLD3) and autophagosome degradation via ESCRT-III pathway
PMID: 39231962
4
RNASEK directly degrades circular RNAs in stress granules with HSP90, preventing age-associated circRNA accumulation and promoting longevity
PMID: 41742417
5
RNASEK upregulated in six cancer types and is diagnostic biomarker; high expression indicates good prognosis in pancreatic adenocarcinoma
PMID: 40546550
6
RNASEK expression upregulated via DKK1-mediated suppression of LRP5 signaling to promote osteoclast precursor recruitment in bone metastasis
PMID: 34847079
7
RNASEK paralogs localize to early/late endosomes and ER; enhance type I interferon secretion and apoptosis via IRF3/IRF7 phosphorylation
PMID: 34880860
8
CFAV infection increases RNASEK expression, which promotes dengue virus replication through endocytosis-dependent viral entry
PMID: 28761113
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.53Moderate
dengue diseaseOpen Targets
0.37Weak
cancerOpen Targets
0.08Suggestive
isolated asymptomatic elevation of creatine phosphokinaseOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.06Suggestive
pentosuriaOpen Targets
0.04Suggestive
tympanic membrane perforationOpen Targets
0.03Suggestive
pancreatic adenocarcinomaOpen Targets
0.03Suggestive
infectionOpen Targets
0.02Suggestive
bladder transitional cell carcinomaOpen Targets
0.02Suggestive
cryopyrin-associated periodic syndromeOpen Targets
0.01Suggestive
ovarian cancerOpen Targets
0.01Suggestive
viral diseaseOpen Targets
0.01Suggestive
prostate cancerOpen Targets
0.01Suggestive
cervical squamous cell carcinomaOpen Targets
0.01Suggestive
benign prostatic hyperplasiaOpen Targets
0.01Suggestive
cholangiocarcinomaOpen Targets
0.01Suggestive
endometrial cancerOpen Targets
0.01Suggestive
neuroepithelial neoplasmOpen Targets
0.01Suggestive
osteosarcomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ATP5MC1Protein interaction100%ATP5MC2Protein interaction100%ATP5MC3Protein interaction100%ATP6V1B1Protein interaction100%ATP6V1B2Protein interaction100%ATP6V1C1Protein interaction100%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
84%
Liver
70%
Brain
56%
Ovary
47%
Heart
28%
Gene Interaction Network
Click a node to explore
RNASEKATP5MC1ATP5MC2ATP5MC3ATP6V1B1ATP6V1B2ATP6V1C1
PROTEIN STRUCTURE
Preparing viewer…
PDB6WLW · 3.00 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.19LoF Tolerant
pLIⓘ
0.04Tolerant
Observed/Expected LoF0.61 [0.33–1.19]
RankingsWhere RNASEK stands among ~20K protein-coding genes
  • #13,728of 20,598
    Most Researched22
  • #12,539of 17,882
    Most Constrained (LOEUF)1.19
Genes detectedRNASEK
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
RSPO2 and RANKL signal through LGR4 to regulate osteoclastic premetastatic niche formation and bone metastasis.
PMID: 34847079
J Clin Invest · 2022
1.00
2
The V-ATPase complex component RNAseK is required for lysosomal hydrolase delivery and autophagosome degradation.
PMID: 39231962
Nat Commun · 2024
0.90
3
Pan-Cancer Analysis Reveals Ribonuclease K (RNASEK) as a Potential Prognostic Biomarker in Pancreatic Cancer and a Diagnostic Indicator Across Multiple Human Cancers.
PMID: 40546550
Cureus · 2025
0.80
4
Identification of novel alternative transcripts of the human Ribonuclease κ (RNASEK) gene using 3' RACE and high-throughput sequencing approaches.
PMID: 31200028
Genomics · 2020
0.70
5
Fish Paralog Proteins RNASEK-a and -b Enhance Type I Interferon Secretion and Promote Apoptosis.
PMID: 34880860
Front Immunol · 2021
0.60