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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RNF10
ring finger protein 10
Chromosome 12 · 12q24.31
NCBI Gene: 9921Ensembl: ENSG00000022840.17HGNC: HGNC:10055UniProt: A0A024RBP0
60PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ubiquitin protein ligase activityprotein autoubiquitinationnonfunctional rRNA decayribosome-associated ubiquitin-dependent protein catabolic processcircadian rhythmBlackfan-Diamond anemiahemoglobin D diseaseAbnormality of the skeletal system
✦AI Summary

RNF10 is an E3 ubiquitin ligase that functions as a critical component of ribosome quality control, catalyzing monoubiquitination of 40S ribosomal proteins RPS2 and RPS3 in response to translation stress 12. RNF10 operates within two distinct quality control pathways: initiation-stage ribosome quality control (iRQC) and elongation-stage mechanisms, both activated by ribosomal subunit imbalance, amino acid starvation, or the integrated stress response downstream of GCN2 345. Mechanistically, RNF10-mediated monoubiquitination marks dysfunctional 40S subunits for recognition by RIOK3 kinase, triggering 18S non-functional rRNA decay and selective 40S ribosomal subunit degradation 46. RNF10 activity is counteracted by the deubiquitinase USP10, providing regulatory balance 2. RNF10 expression levels are tightly coupled to 40S subunit abundance, with protein degradation occurring under 40S biogenesis disruption and accumulation under 60S biogenesis impairment, establishing RNF10 as a sensor of ribosomal stoichiometry 3. Beyond ribosomal function, RNF10 serves as a synaptonuclear messenger regulating synaptic plasticity and transcription 7, and dysregulation of RNF10 expression is associated with aging-related immune dysfunction 8.

Sources cited
1
RNF10 catalyzes monoubiquitination of ribosomal proteins RPS2 and RPS3 as part of ribosome quality control
PMID: 34348161
2
RNF10-mediated ubiquitination is counteracted by USP10 deubiquitinase in ribosome quality control
PMID: 34469731
3
RNF10 responds to ribosomal subunit imbalance and promotes dissociation of stalled ribosomes; RNF10 levels are coupled to 40S subunit availability
PMID: 39609413
4
RNF10-mediated ubiquitination is activated through the GCN2-integrated stress response to promote 18S nonfunctional rRNA decay
PMID: 39947182
5
RIOK3 recognizes RNF10-ubiquitylated 40S ribosomes and mediates their degradation during stress
PMID: 39947183
6
RNF10 ubiquitylates 40S proteins in response to 60S biogenesis disruption or amino acid starvation; RNF10 and RIOK3 levels increase upon iRQC activation
PMID: 40022732
7
RNF10 functions as a synaptonuclear messenger regulating synaptic plasticity and gene transcription
PMID: 29316492
8
RNF10 expression is dysregulated in aged macrophages and associated with aging-related immune dysfunction
PMID: 33249776
Disease Associationsⓘ20
circadian rhythmOpen Targets
0.12Weak
Blackfan-Diamond anemiaOpen Targets
0.07Suggestive
hemoglobin D diseaseOpen Targets
0.06Suggestive
Abnormality of the skeletal systemOpen Targets
0.06Suggestive
Hereditary persistence of fetal hemoglobin - beta-thalassemiaOpen Targets
0.06Suggestive
dominant beta-thalassemiaOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.06Suggestive
hereditary persistence of fetal hemoglobin-sickle cell disease syndromeOpen Targets
0.06Suggestive
inosine triphosphatase deficiencyOpen Targets
0.06Suggestive
hemoglobin E diseaseOpen Targets
0.05Suggestive
alpha thalassemia-intellectual disability syndrome type 1Open Targets
0.05Suggestive
Alpha-thalassemia - intellectual disability syndrome linked to chromosome 16Open Targets
0.05Suggestive
Beta-thalassemiaOpen Targets
0.05Suggestive
mathematical abilityOpen Targets
0.05Suggestive
delta-beta-thalassemiaOpen Targets
0.05Suggestive
Hemoglobin E - beta-thalassemiaOpen Targets
0.05Suggestive
hemoglobin E-beta-thalassemia syndromeOpen Targets
0.05Suggestive
Autosomal dominant methemoglobinemiaOpen Targets
0.05Suggestive
Hemoglobin C - beta-thalassemiaOpen Targets
0.05Suggestive
hemoglobin C-beta-thalassemia syndromeOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RNF220Shared pathway30%RIOK3Co-mentioned in literature30%OBI1Shared pathway25%LTN1Shared pathway25%UBE3DShared pathway22%ASCC2Shared pathway20%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
76%
Lung
73%
Brain
58%
Liver
47%
Ovary
47%
Gene Interaction Network
Click a node to explore
RNF10RNF220RIOK3OBI1LTN1UBE3DASCC2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N5U6
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.52Moderately Constrained
pLIⓘ
0.76Intermediate
Observed/Expected LoF0.39 [0.29–0.52]
RankingsWhere RNF10 stands among ~20K protein-coding genes
  • #7,705of 20,598
    Most Researched60
  • #3,200of 17,882
    Most Constrained (LOEUF)0.52 · top quartile
Genes detectedRNF10
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The integrated stress response regulates 18S nonfunctional rRNA decay in mammals.
PMID: 39947182
Mol Cell · 2025
1.00
2
RNF10 and RIOK3 facilitate 40S ribosomal subunit degradation upon 60S biogenesis disruption or amino acid starvation.
PMID: 40022732
Cell Rep · 2025
0.90
3
E3 ubiquitin ligase RNF10 promotes dissociation of stalled ribosomes and responds to ribosomal subunit imbalance.
PMID: 39609413
Nat Commun · 2024
0.80
4
RIOK3 mediates the degradation of 40S ribosomes.
PMID: 39947183
Mol Cell · 2025
0.70
5
cDNA cloning, expression profile, and genomic structure of human and mouse RNF10/Rnf 10 genes, encoding a novel RING finger protein.
PMID: 10697961
J Hum Genet · 2000
0.60