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25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RNF2
ring finger protein 2
Chromosome 1 · 1q25.3
NCBI Gene: 6045Ensembl: ENSG00000121481.13HGNC: HGNC:10061UniProt: Q99496
259PubMed Papers
21Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub GeneTranscription Factor
RESEARCH IMPACT
Trending
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ubiquitin-protein transferase activitynucleoplasmnucleuszinc ion bindingLuo-Schoch-Yamamoto syndromecomplex neurodevelopmental disorderneurodegenerative diseasebody weight gain
✦AI Summary

RNF2 (RING finger protein 2) is an E3 ubiquitin ligase that serves as an essential component of Polycomb repressive complex 1 (PRC1), primarily functioning to monoubiquitinate histone H2A at lysine 119 (H2AK119ub) for epigenetic transcriptional repression 1. The protein employs a read-write mechanism where it recognizes existing H2AK119ub marks through RYBP and positions its RING domains to ubiquitinate unmodified nucleosomes, creating a positive-feedback loop that maintains repressive chr1 domains during DNA replication 1. Beyond its canonical role, RNF2 exhibits diverse regulatory functions including negative regulation of antiviral immunity by promoting TBK1 ubiquitination and degradation 2, modulation of lipid metabolism in alcohol-associated liver disease through USP7 interaction and PI3K/AKT signaling 3, and promotion of hepatocellular carcinoma progression by inducing myeloid-derived suppressor cell chemotaxis via TRAF2-NF-κB signaling 4. RNF2 is subject to post-translational regulation, being stabilized by USP43-mediated deubiquitination at Lys239 and Lys249 2 and promoting degradation of substrates like SBDS through ubiquitination 5. Clinically, RNF2 overexpression correlates with poor prognosis across multiple cancers and represents a potential therapeutic target 6.

Sources cited
1
RNF2 functions as E3 ubiquitin ligase for H2AK119ub and employs read-write mechanism for epigenetic maintenance
PMID: 39537923
2
RNF2 negatively regulates antiviral immunity by promoting TBK1 ubiquitination and is stabilized by USP43
PMID: 40148469
3
RNF2 modulates lipid metabolism in alcohol-associated liver disease through USP7 interaction
PMID: 40384855
4
RNF2 promotes hepatocellular carcinoma progression through TRAF2-NF-κB signaling and MDSC recruitment
PMID: 40146286
5
RNF2 ubiquitinates and promotes proteasomal degradation of SBDS
PMID: 35158210
6
RNF2 overexpression correlates with poor prognosis in multiple cancers
PMID: 33400276
Disease Associationsⓘ21
Luo-Schoch-Yamamoto syndromeOpen Targets
0.62Moderate
complex neurodevelopmental disorderOpen Targets
0.37Weak
neurodegenerative diseaseOpen Targets
0.35Weak
body weight gainOpen Targets
0.33Weak
glomerulonephritisOpen Targets
0.30Weak
epilepsyOpen Targets
0.18Weak
fetal growth restrictionOpen Targets
0.18Weak
Intellectual disabilityOpen Targets
0.18Weak
neoplasmOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.11Weak
breast cancerOpen Targets
0.10Weak
Hashimoto's thyroiditisOpen Targets
0.09Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
gliomaOpen Targets
0.08Suggestive
squamous cell carcinomaOpen Targets
0.08Suggestive
posterior cortical atrophyOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
melanomaOpen Targets
0.07Suggestive
esophageal squamous cell carcinomaOpen Targets
0.07Suggestive
cancerOpen Targets
0.06Suggestive
Luo-Schoch-Yamamoto syndromeUniProt
Pathogenic Variants1
NM_007212.4(RNF2):c.246T>G (p.Ser82Arg)Pathogenic
Luo-Schoch-Yamamoto syndrome
☆☆☆☆2021→ Residue 82
View on ClinVar ↗
Related Genes
BMI1Protein interaction100%PHC2Protein interaction100%EZH2Protein interaction100%JARID2Protein interaction100%BABAM2Protein interaction100%UBAP2LProtein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
88%
Heart
66%
Ovary
53%
Lung
48%
Liver
34%
Gene Interaction Network
Click a node to explore
RNF2BMI1PHC2EZH2JARID2BABAM2UBAP2L
PROTEIN STRUCTURE
Preparing viewer…
PDB3GS2 · 1.70 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.32Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.15 [0.08–0.32]
RankingsWhere RNF2 stands among ~20K protein-coding genes
  • #1,474of 20,598
    Most Researched259 · top 10%
  • #4,687of 5,498
    Most Pathogenic Variants1
  • #1,299of 17,882
    Most Constrained (LOEUF)0.32 · top 10%
Genes detectedRNF2
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
The USP43/RNF2 axis negatively regulates antiviral innate immunity by promoting TBK1 ubiquitination and degradation.
PMID: 40148469
Cell Death Differ · 2025
1.00
2
CPT1A promotes anoikis resistance in esophageal squamous cell carcinoma via redox homeostasis.
PMID: 36427397
Redox Biol · 2022
0.90
3
RING1 missense variants reveal sensitivity of DNA damage repair to H2A monoubiquitination dosage during neurogenesis.
PMID: 39256363
Nat Commun · 2024
0.84
4
Emerging role of RNF2 in cancer: From bench to bedside.
PMID: 33400276
J Cell Physiol · 2021
0.80
5
Tracing the evolution of single-cell 3D genomes in Kras-driven cancers.
PMID: 40825871
Nat Genet · 2025
0.72