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4 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SAA2-SAA4
SAA2-SAA4 readthrough
Chromosome 11 · 11p15.1
NCBI Gene: 100528017Ensembl: ENSG00000255071.3HGNC: HGNC:39550UniProt: A0A096LPE2
2PubMed Papers
2Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Swiss-Prot Reviewed
colorectal cancerulcerative colitis
✦AI Summary

SAA2-SAA4 is a readthrough transcript located on chromosome 11 that encodes an acute-phase reactant protein. The gene functions as part of the innate immune and inflammatory response system. SAA2-SAA4 is expressed in lung tissue as part of a cluster of acute-phase reactant genes (SAA1, SAA2, and SAA2-SAA4) that respond to inflammatory conditions 1. The protein participates in lipid-lipoprotein metabolism and plasma lipoprotein particle remodeling, functioning downstream of multiple signaling pathways including complement and coagulation cascades 2. Clinically, SAA2-SAA4 has emerged as a potential biomarker in several disease states. It was identified as a hub protein in salivary proteomics analysis of medication-related osteonecrosis of the jaw (MRONJ), a serious complication of bisphosphonate therapy, where it participates in pathogenic processes involving macromolecular and lipoprotein complex remodeling 2. Additionally, SAA2-SAA4 expression was significantly altered in children with perinatally acquired HIV-1 experiencing transient viral rebound, with downregulation correlating with decreased CD4/CD8 ratios and serving as a potential immunological marker of disease progression 3. While identified in hepatitis C-related cirrhosis transcriptome studies, validation of SAA2-SAA4 as a diagnostic biomarker in this context showed limited agreement between sequencing and qRT-PCR methods 4.

Sources cited
1
SAA2-SAA4 identified as acute-phase reactant gene expressed in lung tissue, part of cluster with SAA1 and SAA2
PMID: 27588449
2
SAA2-SAA4 identified as hub protein in salivary proteomics of MRONJ, involved in lipoprotein particle remodeling and innate immune pathways
PMID: 39596473
3
SAA2-SAA4 readthrough downregulated in HIV-1 children with transient viral rebound, correlates with CD4/CD8 ratio changes
PMID: 36727571
4
SAA2-SAA4 identified in HCV cirrhosis transcriptome but showed poor validation agreement between RNA-seq and qRT-PCR methods
PMID: 39216827
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ2
colorectal cancerOpen Targets
0.00Suggestive
ulcerative colitisOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
APOA1Protein interaction91%PLTPProtein interaction91%SAA1Protein interaction91%SAA2Protein interaction91%SAA4Protein interaction91%TTRProtein interaction91%
Tissue Expression6 tissues
Liver
100%
Lung
0%
Bone Marrow
0%
Heart
0%
Ovary
0%
Brain
0%
Gene Interaction Network
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SAA2-SAA4APOA1PLTPSAA1SAA2SAA4TTR
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt A0A096LPE2
View on AlphaFold ↗
RankingsWhere SAA2-SAA4 stands among ~20K protein-coding genes
  • #19,223of 20,598
    Most Researched2
Genes detectedSAA2-SAA4
Sources retrieved4 papers
Response time—
📄 Sources
4
1
Insights into Medication-Induced Osteonecrosis of the Jaw Through the Application of Salivary Proteomics and Bioinformatics.
PMID: 39596473
Int J Mol Sci · 2024
1.00
2
Complex Sources of Variation in Tissue Expression Data: Analysis of the GTEx Lung Transcriptome.
PMID: 27588449
Am J Hum Genet · 2016
0.75
3
New insights into potential biomarkers and their roles in biological processes associated with hepatitis C-related liver cirrhosis by hepatic RNA-seq-based transcriptome profiling.
PMID: 39216827
Virus Res · 2024
0.50
4
Transient Viral Rebound in Children with Perinatally Acquired HIV-1 Induces a Unique Soluble Immunometabolic Signature Associated with Decreased CD4/CD8 Ratio.
PMID: 36727571
J Pediatric Infect Dis Soc · 2023
0.25