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9 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SAMTOR
S-adenosylmethionine sensor upstream of mTORC1
Chromosome 7 · 7q31.1
NCBI Gene: 154743Ensembl: ENSG00000164603.13HGNC: HGNC:26475UniProt: Q1RMZ1
24PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cellular response to amino acid starvationprotein-containing complex bindingS-adenosyl-L-methionine bindingpositive regulation of TORC1 signalingbilirubin metabolism diseasepyogenic granulomaglomerulonephritismetabolic syndrome
✦AI Summary

SAMTOR (S-adenosylmethionine sensor upstream of mTORC1) is a SAM-binding protein that acts as a nutrient sensor linking methionine metabolism to mTORC1 signaling. SAMTOR inhibits mTORC1 by interacting with GATOR1 and KICSTOR complexes; this interaction is disrupted when SAMTOR binds S-adenosylmethionine (SAM) with a dissociation constant of approximately 7 μM 1. Under methionine-replete conditions, SAM binding to SAMTOR causes release from GATOR1/KICSTOR, promoting mTORC1 activation and cell growth 1. Conversely, methionine starvation reduces SAM levels below the dissociation threshold, allowing SAMTOR-GATOR1/KICSTOR reassociation and mTORC1 inhibition 1. Structural studies reveal SAMTOR binds KICSTOR in a manner incompatible with metabolite binding, providing molecular basis for methionine sensing 2. Functionally, SAMTOR participates in the SAMTOR/mTORC1/S6K1/CAD pathway regulating DNA synthesis during embryo implantation 3. SAMTOR has been identified as a characteristic gene in constitutional medicine studies, with diagnostic value in disease detection 4. This SAM-sensing mechanism represents a fundamental link between one-carbon metabolism and mTORC1-mediated growth control.

Sources cited
1
SAMTOR inhibits mTORC1 by interacting with GATOR1; SAM binding disrupts this interaction with ~7 μM Kd; methionine starvation promotes SAMTOR-GATOR1 association and mTORC1 inhibition
PMID: 29123071
2
SAMTOR binds KICSTOR in manner incompatible with metabolite binding, providing structural mechanism for methionine sensing via KICSTOR-GATOR1 supercomplex
PMID: 41512879
3
SAMTOR functions in SAMTOR/mTORC1/S6K1/CAD pathway to promote methionine-mediated DNA synthesis during embryo implantation
PMID: 33179842
4
SAMTOR (C7orf60) identified as characteristic gene with diagnostic value in Traditional Chinese Medicine constitution studies
PMID: 40810238
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
bilirubin metabolism diseaseOpen Targets
0.29Weak
pyogenic granulomaOpen Targets
0.27Weak
glomerulonephritisOpen Targets
0.22Weak
metabolic syndromeOpen Targets
0.07Suggestive
Premature ovarian insufficiencyOpen Targets
0.07Suggestive
smoking initiationOpen Targets
0.05Suggestive
Abnormality of the skeletal systemOpen Targets
0.05Suggestive
malunion fractureOpen Targets
0.04Suggestive
placenta praeviaOpen Targets
0.03Suggestive
prostate cancerOpen Targets
0.01Suggestive
chronic kidney diseaseOpen Targets
0.01Suggestive
posterior cortical atrophyOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
meningococcal infectionOpen Targets
0.00Suggestive
homocystinuriaOpen Targets
0.00Suggestive
neuroblastomaOpen Targets
0.00Suggestive
type 1 diabetes mellitusOpen Targets
0.00Suggestive
acute lymphoblastic leukemiaOpen Targets
0.00Suggestive
prostate adenocarcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DEPDC5Protein interaction100%SZT2Protein interaction100%KPTNProtein interaction100%NPRL3Protein interaction87%RRAGBProtein interaction73%RRAGAProtein interaction70%
Tissue Expression6 tissues
Heart
100%
Brain
48%
Bone Marrow
27%
Ovary
23%
Lung
19%
Liver
10%
Gene Interaction Network
Click a node to explore
SAMTORDEPDC5SZT2KPTNNPRL3RRAGBRRAGA
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q1RMZ1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.51Moderately Constrained
pLIⓘ
0.98Intolerant
Observed/Expected LoF0.30 [0.18–0.51]
RankingsWhere SAMTOR stands among ~20K protein-coding genes
  • #13,291of 20,598
    Most Researched24
  • #3,083of 17,882
    Most Constrained (LOEUF)0.51 · top quartile
Genes detectedSAMTOR
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
SAMTOR is an
PMID: 29123071
Science · 2017
1.00
2
Structure of the lysosomal KICSTOR-GATOR1-SAMTOR nutrient-sensing supercomplex.
PMID: 41512879
Cell · 2026
0.89
3
Efficient Method for Liposome-Based Gene Transfer in Cattle Embryos.
PMID: 39400401
Reprod Domest Anim · 2024
0.78
4
CBS and MAT2A improve methionine-mediated DNA synthesis through SAMTOR/mTORC1/S6K1/CAD pathway during embryo implantation.
PMID: 33179842
Cell Prolif · 2021
0.67
5
Identification of characteristic genes ofanddeficiency constitutions: an integrated analysis based on bioinformatics and machine learning.
PMID: 40810238
J Tradit Chin Med · 2025
0.56