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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SDR16C5
short chain dehydrogenase/reductase family 16C member 5
Chromosome 8 · 8q12.1
NCBI Gene: 195814Ensembl: ENSG00000170786.13HGNC: HGNC:30311UniProt: B3KT84
23PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
endoplasmic reticulumplasma membranetranscription corepressor activityall-trans-retinol dehydrogenase (NAD+) activitySplenomegalycentral nervous system cancercolorectal adenocarcinomapancreatic adenocarcinoma
✦AI Summary

SDR16C5 is a short-chain dehydrogenase/reductase enzyme that functions as an NAD+-dependent oxidoreductase capable of bidirectional catalytic activity 1. Its primary enzymatic function involves oxidizing all-trans-retinol to all-trans-retinaldehyde, with no activity detected toward 11-cis-retinol substrates 1. Beyond retinoid metabolism, SDR16C5 plays a central role in fatty alcohol and aldehyde metabolism in vivo, selectively oxidizing a wide range of straight-chain fatty alcohols to fatty aldehydes in meibomian glands, thereby maintaining the balance between fatty acids, fatty alcohols, and aldehydes 2. This metabolic function is particularly relevant in tissues like hair follicles, where SDR16C5 localizes to refractory telogen follicles and may contribute to vitamin A-dependent inhibition of hair follicle stem cells 3. Clinically, SDR16C5 has emerged as a diagnostic and prognostic biomarker across multiple malignancies. Its upregulation is associated with pancreatic cancer diagnosis with high sensitivity and specificity 4, correlates with HPV-positive oropharyngeal squamous cell carcinoma status 5, and serves as a prognostic gene signature component in colorectal cancer prognosis prediction 6. Additionally, SDR16C5 is elevated in various idiopathic interstitial pneumonias subtypes 7, suggesting broader disease relevance in inflammatory and fibrotic conditions.

Sources cited
1
SDR16C5 is an NAD+-dependent oxidoreductase that oxidizes all-trans-retinol to all-trans-retinaldehyde with activity in both directions
PMID: 18926804
2
SDR16C5/SDR16C6 selectively oxidizes fatty alcohols to fatty aldehydes and plays a central role in fatty acid/alcohol/aldehyde metabolism in vivo
PMID: 40473210
3
SDR16C5 localizes to refractory telogen hair follicles and may contribute to vitamin A-dependent inhibition of hair follicle stem cells
PMID: 33614636
4
SDR16C5 is a hub gene upregulated in pancreatic cancer with diagnostic value in machine learning models
PMID: 33815409
5
SDR16C5 expression is strongly elevated in HPV-positive oropharyngeal squamous cell carcinoma and correlates with patient survival
PMID: 38898137
6
SDR16C5 serves as one of three gene signatures for colorectal cancer prognosis prediction with acetylation-related pathway involvement
PMID: 35604486
7
SDR16C5 is significantly upregulated in multiple subtypes of idiopathic interstitial pneumonias
PMID: 25058599
Disease Associationsⓘ20
SplenomegalyOpen Targets
0.24Weak
central nervous system cancerOpen Targets
0.04Suggestive
colorectal adenocarcinomaOpen Targets
0.04Suggestive
pancreatic adenocarcinomaOpen Targets
0.04Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
connective tissue diseaseOpen Targets
0.03Suggestive
sessile serrated polypOpen Targets
0.03Suggestive
medulloblastomaOpen Targets
0.03Suggestive
diabetes mellitusOpen Targets
0.03Suggestive
pancreatic carcinomaOpen Targets
0.02Suggestive
diabetic ketoacidosisOpen Targets
0.02Suggestive
astrocytomaOpen Targets
0.02Suggestive
ependymomaOpen Targets
0.02Suggestive
lung carcinomaOpen Targets
0.02Suggestive
Colon Sessile Serrated Adenoma/PolypOpen Targets
0.02Suggestive
brain aneurysmOpen Targets
0.02Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
primitive neuroectodermal tumorOpen Targets
0.02Suggestive
childhood supratentorial ependymomaOpen Targets
0.01Suggestive
ulcerative colitisOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ALDH1A1Protein interaction94%CYP26A1Protein interaction94%PNPLA4Protein interaction94%HSD17B6Protein interaction94%DGAT1Protein interaction94%ALDH1A2Protein interaction94%
Tissue Expression6 tissues
Lung
100%
Brain
9%
Ovary
0%
Liver
0%
Bone Marrow
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SDR16C5ALDH1A1CYP26A1PNPLA4HSD17B6DGAT1ALDH1A2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8N3Y7
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.20LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.72 [0.46–1.20]
RankingsWhere SDR16C5 stands among ~20K protein-coding genes
  • #13,513of 20,598
    Most Researched23
  • #12,600of 17,882
    Most Constrained (LOEUF)1.20
Genes detectedSDR16C5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Biosynthesis of fatty aldehydes and alcohols in the eye and their role in meibogenesis.
PMID: 40473210
J Biol Chem · 2025
1.00
2
PMID: 33815409
Front Immunol · 2021
0.90
3
LRG1 and SDR16C5 protein expressions differ according to HPV status in oropharyngeal squamous cell carcinoma.
PMID: 38898137
Sci Rep · 2024
0.80
4
Dietary Vitamin A Impacts Refractory Telogen.
PMID: 33614636
Front Cell Dev Biol · 2021
0.70
5
Clinical Value Screening, Prognostic Significance, and Key Gene Identification of TrkB in Laryngeal Carcinoma.
PMID: 36033826
Dis Markers · 2022
0.60