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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
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SLC7A7
solute carrier family 7 member 7
Chromosome 14 Β· 14q11.2
NCBI Gene: 9056Ensembl: ENSG00000155465.22HGNC: HGNC:11065UniProt: A0A0S2Z502
46PubMed Papers
21Diseases
0Drugs
158Pathogenic Variants
FUNCTIONAL ROLE
Transporter
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
basolateral plasma membraneL-leucine transportprotein bindingamino acid import across plasma membranelysinuric protein intoleranceautoinflammatory syndromeSensorineural hearing impairmenttype 2 diabetes mellitus
✦AI Summary

SLC7A7 encodes y+LAT-1, the catalytic light chain of a heterodimeric amino acid transporter that functions with SLC3A2 (4F2hc) to mediate cationic amino acid transport 1. The transporter operates as an electroneutral antiporter, exchanging intracellular cationic amino acids (particularly L-arginine and lysine) for extracellular neutral amino acids and sodium ions 1. This mechanism is essential for arginine availability, supporting nitric oxide synthesis and monocyte/macrophage function 2. Beyond canonical transport, SLC7A7 exerts anti-inflammatory effects, acting as a physiological brake on inflammatory signaling through NFΞΊB-dependent pathways in macrophages and epithelial cells 2. Recent evidence reveals SLC7A7's role in metabolic reprogramming: it mediates glutamine influx in atherosclerotic macrophages, enabling GLS1-dependent glutaminolysis required for restorative immune functions and plaque stability 3. In hepatocellular carcinoma, ATF3-driven SLC7A7 expression suppresses mTORC1 signaling and lipogenesis, implicating SLC7A7 in tumor suppression 4. Clinically, biallelic SLC7A7 mutations cause lysinuric protein intolerance (LPI), a rare inherited aminoaciduria presenting with protein malabsorption, hyperammonemia, and complications including hepatosplenomegaly, neurological impairment, and immune dysfunction 1 5. Expert consensus supports SLC7A7-LPI screening in newborn genome sequencing for early therapeutic intervention 6.

Sources cited
1
SLC7A7 encodes y+LAT-1, the catalytic light chain mediating cationic amino acid transport; mutations cause lysinuric protein intolerance
PMID: 17764084
2
SLC7A7 downregulation triggers inflammatory phenotype in macrophages and epithelial cells through NFΞΊB pathway; acts as physiological brake on inflammation
PMID: 29616026
3
SLC7A7 mediates glutamine influx in atherosclerotic macrophages, enabling glutaminolysis for restorative functions and plaque stability
PMID: 40983679
4
ATF3-driven SLC7A7 expression suppresses mTORC1 signaling and lipogenesis in hepatocellular carcinoma
PMID: 39996726
5
SLC7A7 mutations in lysinuric protein intolerance cause protein malabsorption, hyperammonemia, and complications including hepatosplenomegaly and neurological impairment
PMID: 38801286
6
Expert consensus supports SLC7A7-LPI inclusion in newborn genome sequencing for treatable disorders
PMID: 37155167
Disease Associationsβ“˜21
lysinuric protein intoleranceOpen Targets
0.85Strong
autoinflammatory syndromeOpen Targets
0.41Moderate
Sensorineural hearing impairmentOpen Targets
0.37Weak
type 2 diabetes mellitusOpen Targets
0.30Weak
genetic disorderOpen Targets
0.19Weak
amino acid metabolism diseaseOpen Targets
0.19Weak
cancerOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.06Suggestive
pachyonychia congenitaOpen Targets
0.05Suggestive
galactose epimerase deficiencyOpen Targets
0.04Suggestive
benign neoplasm of pituitary glandOpen Targets
0.04Suggestive
lung cancerOpen Targets
0.04Suggestive
Choanal atresia-deafness-cardiac defects-dysmorphism syndromeOpen Targets
0.04Suggestive
Tyrosinemia type 1Open Targets
0.04Suggestive
saccharopinuriaOpen Targets
0.04Suggestive
neonatal severe primary hyperparathyroidismOpen Targets
0.03Suggestive
congenital heart defect-round face-developmental delay syndromeOpen Targets
0.03Suggestive
Heart defect - round face - congenital developmental delayOpen Targets
0.03Suggestive
Lysinuric protein intoleranceUniProt
Pathogenic Variants158
NM_003982.4(SLC7A7):c.2T>C (p.Met1Thr)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2026β†’ Residue 1
NM_003982.4(SLC7A7):c.1387del (p.Val463fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2026β†’ Residue 463
NM_003982.4(SLC7A7):c.726G>A (p.Trp242Ter)Pathogenic
Lysinuric protein intolerance|not provided|Autoinflammatory syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 242
NM_003982.4(SLC7A7):c.377del (p.Ile126fs)Pathogenic
Lysinuric protein intolerance|SLC7A7-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 126
NM_003982.4(SLC7A7):c.1122C>A (p.Cys374Ter)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2026β†’ Residue 374
NM_003982.4(SLC7A7):c.625+1G>APathogenic
Lysinuric protein intolerance|not provided|SLC7A7-related disorder
β˜…β˜…β˜†β˜†2025
NM_003982.4(SLC7A7):c.1381_1384del (p.Ile461fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 461
NM_003982.4(SLC7A7):c.770+1G>TPathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025
NM_003982.4(SLC7A7):c.1429+1G>CPathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025
NM_003982.4(SLC7A7):c.1263_1269del (p.Ile422fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 422
NM_003982.4(SLC7A7):c.371T>C (p.Leu124Pro)Likely pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 124
NM_003982.4(SLC7A7):c.1116C>G (p.Tyr372Ter)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 372
NM_003982.4(SLC7A7):c.895-2A>TPathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025
NM_003982.4(SLC7A7):c.1417C>T (p.Arg473Ter)Pathogenic
Lysinuric protein intolerance|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 473
NM_003982.4(SLC7A7):c.701del (p.Tyr233_Ser234insTer)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 233
NM_003982.4(SLC7A7):c.346_349del (p.Ala116fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 116
NM_003982.4(SLC7A7):c.895-2A>GPathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025
NM_003982.4(SLC7A7):c.1001T>G (p.Leu334Arg)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 334
NM_003982.4(SLC7A7):c.1185_1188del (p.Ser396fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 396
NM_003982.4(SLC7A7):c.1383_1384del (p.Ile461fs)Pathogenic
Lysinuric protein intolerance
β˜…β˜…β˜†β˜†2025β†’ Residue 461
View on ClinVar β†—
Related Genes
SLC3A1Protein interaction89%SLC3A2Protein interaction89%SLC7A6Shared pathway50%SLC7A4Shared pathway33%SLC7A3Shared pathway33%SLC38A4Shared pathway25%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
37%
Liver
13%
Heart
8%
Ovary
6%
Brain
6%
Gene Interaction Network
Click a node to explore
SLC7A7SLC3A1SLC3A2SLC7A6SLC7A4SLC7A3SLC38A4
PROTEIN STRUCTURE
Preparing viewer…
PDB9KJU Β· 2.70 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.01LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.77 [0.59–1.01]
RankingsWhere SLC7A7 stands among ~20K protein-coding genes
  • #9,382of 20,598
    Most Researched46
  • #475of 5,498
    Most Pathogenic Variants158 Β· top 10%
  • #9,775of 17,882
    Most Constrained (LOEUF)1.01
Genes detectedSLC7A7
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Identification of a lactylation-related gene signature as the novel biomarkers for early diagnosis of acute myocardial infarction.
PMID: 39521235
Int J Biol Macromol Β· 2024
1.00
2
Slc7a7 licenses macrophage glutaminolysis for restorative functions in atherosclerosis.
PMID: 40983679
Nat Metab Β· 2025
0.90
3
Lysinuric protein intolerance: update and extended mutation analysis of the SLC7A7 gene.
PMID: 17764084
Hum Mutat Β· 2008
0.80
4
Frequency and spectrum of disease-causing variants in 1892 patients with suspected genetic HLH disorders.
PMID: 32542393
Blood Adv Β· 2020
0.70
5
[Not Available].
PMID: 38801286
Tunis Med Β· 2024
0.60