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GeneE
3 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SMLR1
small leucine rich protein 1
Chromosome 6 Β· 6q23.1
NCBI Gene: 100507203Ensembl: ENSG00000256162.2HGNC: HGNC:44670UniProt: H3BR10
6PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingmembranePainsmoking initiationabscessnervous system benign neoplasm
✦AI Summary

SMLR1 (small leucine-rich protein 1) is a liver and small intestine-specific protein with emerging roles in lipid metabolism and potential anticancer activity. Primary function: SMLR1 regulates hepatic VLDL (very-low-density lipoprotein) assembly and secretion by facilitating trafficking from the endoplasmic reticulum to the Cis-Golgi complex 1. Mechanism: The protein localizes to the endoplasmic reticulum and Cis-Golgi, where it promotes VLDL biogenesis independent of microsomal triglyceride transfer protein activity 1. Disease relevance: Loss of hepatic SMLR1 causes hepatic steatosis and nonalcoholic fatty liver disease (NASH), while paradoxically reducing plasma apolipoprotein B and triglycerides, thereby protecting against diet-induced hyperlipidemia and atherosclerosis 1. Additionally, SMLR1 was identified as a novel anticancer gene in a systematic screen, suggesting potential therapeutic applications in cancer treatment 2. Clinical significance: SMLR1 represents a therapeutic target for modulating hepatic lipid metabolism and VLDL secretion; however, manipulating SMLR1 involves metabolic trade-offs between cardiovascular protection and hepatic lipid accumulation 1. The protein's role in lipid metabolism aligns with bioinformatic predictions of lipid metabolism involvement 3.

Sources cited
1
SMLR1 localizes to endoplasmic reticulum and Cis-Golgi complex; regulates VLDL trafficking and secretion; loss causes hepatic steatosis and NASH but protects against atherosclerosis
PMID: 36053190
2
SMLR1 identified as novel anticancer gene in systematic gain-of-function genetic screen
PMID: 37864183
3
Bioinformatic analysis predicted SMLR1 involvement in lipid metabolism
PMID: 34318869
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
PainOpen Targets
0.31Weak
smoking initiationOpen Targets
0.24Weak
abscessOpen Targets
0.23Weak
nervous system benign neoplasmOpen Targets
0.23Weak
duodenal ulcerOpen Targets
0.20Weak
cellulitisOpen Targets
0.20Weak
placental retentionOpen Targets
0.19Weak
respiratory system diseaseOpen Targets
0.19Weak
Cerebral degenerationOpen Targets
0.18Weak
knee fractureOpen Targets
0.17Weak
gastric cancerOpen Targets
0.15Weak
androgenetic alopeciaOpen Targets
0.14Weak
agingOpen Targets
0.07Suggestive
urolithiasisOpen Targets
0.06Suggestive
Crohn's diseaseOpen Targets
0.05Suggestive
colorectal cancerOpen Targets
0.04Suggestive
cervical carcinomaOpen Targets
0.04Suggestive
sialadenitisOpen Targets
0.03Suggestive
non-alcoholic steatohepatitisOpen Targets
0.03Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
CXorf58Protein interaction77%
Tissue Expression6 tissues
Liver
100%
Ovary
1%
Lung
0%
Bone Marrow
0%
Heart
0%
Brain
0%
Gene Interaction Network
Click a node to explore
SMLR1CXorf58
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt H3BR10
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.11LoF Tolerant
pLIβ“˜
0.17Tolerant
Observed/Expected LoF0.49 [0.24–1.11]
RankingsWhere SMLR1 stands among ~20K protein-coding genes
  • #18,212of 20,598
    Most Researched6
  • #11,460of 17,882
    Most Constrained (LOEUF)1.11
Genes detectedSMLR1
Sources retrieved3 papers
Response timeβ€”
πŸ“„ Sources
3
1
Genetic screening for anticancer genes highlights FBLN5 as a synthetic lethal partner of MYC.
PMID: 37864183
Cell Commun Signal Β· 2023
1.00
2
Functionathon: a manual data mining workflow to generate functional hypotheses for uncharacterized human proteins and its application by undergraduate students.
PMID: 34318869
Database (Oxford) Β· 2021
0.67
3
Loss of hepatic SMLR1 causes hepatosteatosis and protects against atherosclerosis due to decreased hepatic VLDL secretion.
PMID: 36053190
Hepatology Β· 2023
0.33