HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SNX17
sorting nexin 17
Chromosome 2 · 2p23.3
NCBI Gene: 9784Ensembl: ENSG00000115234.12HGNC: HGNC:14979UniProt: B4DDM3
76PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
early endosomeendosomeGolgi apparatuslow-density lipoprotein particle receptor bindingretinitis pigmentosaautosomal dominant retinitis pigmentosaleukoencephalopathy with vanishing white matterCACH syndrome
✦AI Summary

SNX17 is a critical endosomal adaptor protein that regulates surface protein recycling by recognizing NPxY motifs in cargo cytoplasmic tails 1 and binding phosphatidylinositol 3-phosphate on endosomal membranes 2. SNX17 adopts an autoinhibited conformation where its C-terminal tail is sequestered; cargo binding displaces this tail, enabling association with the Retriever complex subunits VPS35L and VPS26C 34. This SNX17-Retriever-CCC-WASH axis prevents lysosomal degradation and promotes recycling of over 120 surface proteins including integrins, receptors, and transporters 5. SNX17 maintains normal cell surface levels of APP and LRP1 26, and critically regulates LDLR recycling—PCSK9 blocks SNX17-mediated LDLR salvage, driving receptor degradation 7. SNX17 dysregulation drives disease pathogenesis. In hepatocellular carcinoma, SNX17 overexpression promotes proliferation and metastasis via retromer-dependent STAT3 activation and c-Myc upregulation 8. In immunotherapy, elevated SNX17 confers anti-PD-1 resistance by stabilizing RUNX2, increasing uridine degradation in the tumor microenvironment and suppressing CD8+ T cell function 9. SNX17-dependent endocytic cargo in neurons includes neurodegenerative disease risk factors 10. These findings establish SNX17 as both a central recycling hub and therapeutic target across multiple pathologies.

Sources cited
1
SNX17 binds to NPxY sequences in cytoplasmic tails of target cargo proteins
PMID: 21512128
2
SNX17 interacts with phosphatidylinositol 3-phosphate membranes and maintains APP surface levels
PMID: 16712798
3
SNX17 is required for maintenance of normal cell surface levels of LRP1
PMID: 19005208
4
SNX17 adopts an autoinhibited conformation; cargo binding displaces C-terminal tail enabling Retriever complex binding
PMID: 39587083
5
SNX17 carboxy-terminal tail binds Retriever sub-complex; competitive cargo binding overcomes autoinhibition
PMID: 39168982
6
SNX17-Retriever-CCC-WASH complex prevents lysosomal degradation and promotes recycling of over 120 surface proteins including integrins
PMID: 28892079
7
PCSK9 prevents SNX17-mediated LDLR recycling, driving lysosomal degradation; SNX17 knockdown abolishes LDLR recycling
PMID: 40071387
8
SNX17 overexpression in hepatocellular carcinoma promotes proliferation and metastasis via retromer-dependent STAT3 activation and c-Myc pathway
PMID: 40303303
9
SNX17 elevation confers anti-PD-1 resistance; SNX17 stabilizes RUNX2 promoting uridine degradation and suppressing CD8+ T cell function
PMID: 41468885
10
SNX17-dependent endocytic cargo in neurons includes proteins with SNX17 recognition motifs relevant to neurodegenerative disease
PMID: 39636867
Disease Associationsⓘ20
retinitis pigmentosaOpen Targets
0.18Weak
autosomal dominant retinitis pigmentosaOpen Targets
0.16Weak
CACH syndromeOpen Targets
0.15Weak
leukoencephalopathy with vanishing white matterOpen Targets
0.15Weak
alcohol drinkingOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
Crohn's diseaseOpen Targets
0.07Suggestive
HeterotaxiaOpen Targets
0.06Suggestive
Congenitally uncorrected transposition of the great arteriesOpen Targets
0.06Suggestive
Aortic CoarctationOpen Targets
0.06Suggestive
Rare genetic vascular diseaseOpen Targets
0.06Suggestive
goutOpen Targets
0.06Suggestive
familial thoracic aortic aneurysm and aortic dissectionOpen Targets
0.05Suggestive
atrial septal defect 1Open Targets
0.05Suggestive
Fallot complex - intellectual disability - growth delayOpen Targets
0.05Suggestive
fallot complex-intellectual disability-growth delay syndromeOpen Targets
0.05Suggestive
conotruncal heart malformationsOpen Targets
0.05Suggestive
atrial heart septal defectOpen Targets
0.05Suggestive
hyperlipidemiaOpen Targets
0.05Suggestive
congenital heart defects, multiple types, 4Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
VPS35Protein interaction100%SELPProtein interaction100%KRIT1Protein interaction100%VPS29Protein interaction99%SNX5Protein interaction95%LRP8Protein interaction90%
Tissue Expression6 tissues
Heart
100%
Liver
99%
Lung
97%
Ovary
89%
Brain
76%
Bone Marrow
61%
Gene Interaction Network
Click a node to explore
SNX17VPS35SELPKRIT1VPS29SNX5LRP8
PROTEIN STRUCTURE
Preparing viewer…
PDB3LUI · 1.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.70LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.53 [0.41–0.70]
RankingsWhere SNX17 stands among ~20K protein-coding genes
  • #6,288of 20,598
    Most Researched76
  • #5,386of 17,882
    Most Constrained (LOEUF)0.70
Genes detectedSNX17
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Uridine depletion impairs CD8⁺ T cell antitumor activity through N-glycosylation.
PMID: 41468885
Cell Metab · 2026
1.00
2
PCSK9 Promotes LDLR Degradation by Preventing SNX17-Mediated LDLR Recycling.
PMID: 40071387
Circulation · 2025
0.90
3
Structural basis for Retriever-SNX17 assembly and endosomal sorting.
PMID: 39587083
Nat Commun · 2024
0.80
4
Potential Roles of SNX17, Rab11, and Rab5 in LDLR Recycling.
PMID: 40534554
Arterioscler Thromb Vasc Biol · 2025
0.70
5
SNX17 mediates STAT3 activation to promote hepatocellular carcinoma progression via a retromer dependent mechanism.
PMID: 40303303
Int J Biol Sci · 2025
0.60