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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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SPG7
SPG7 matrix AAA peptidase subunit, paraplegin
Chromosome 16 Β· 16q24.3
NCBI Gene: 6687Ensembl: ENSG00000197912.16HGNC: HGNC:11237UniProt: A0A2R8Y3M4
100PubMed Papers
21Diseases
0Drugs
187Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneProtease
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
mitochondrial outer membrane permeabilization involved in programmed cell deathmitochondrial inner membranemitochondrionprotein bindingAutosomal recessive spastic paraplegia type 7hereditary spastic paraplegia 7hereditary spastic paraplegiagenetic disorder
✦AI Summary

SPG7 encodes paraplegin, a catalytic component of the mitochondrial m-AAA protease complex essential for proteostasis of inner mitochondrial membrane proteins and neuronal development 1. The protein possesses both ATPase and protease activities, functioning in protein quality control by degrading misfolded polypeptides and mediating processing of specific regulatory proteins. SPG7 regulates mitochondrial calcium homeostasis by controlling degradation of calcium transport regulators SMDT1/EMRE and MCU, limiting calcium uptake capacity. The protein also plays a role in mitochondrial permeability transition pore (mPTP) regulation, where under normal conditions SPG7 is tethered to PHB1 to inhibit mPTP opening, but PHB1 downregulation enhances SPG7-AFG3L2 interaction leading to mPTP activation and inflammatory responses 2. Mutations in SPG7 cause hereditary spastic paraplegia type 7, an autosomal recessive neurodegenerative disorder characterized by progressive spasticity and weakness of lower extremities 3. SPG7 is among the most frequently mutated genes in hereditary spastic paraplegia, representing 4.8% of cases 3. Patients may present with additional movement disorders including parkinsonism, dystonia, tremor, and ataxia, particularly in complicated forms 4.

Sources cited
1
SPG7 encodes paraplegin involved in hereditary spastic paraplegia and mitochondrial dysfunction
PMID: 12933917
2
SPG7 interacts with PHB1 and AFG3L2 to regulate mitochondrial permeability transition pore and inflammatory responses
PMID: 36245295
3
SPG7 is the second most frequently mutated gene in hereditary spastic paraplegia, representing 4.8% of cases
PMID: 34983064
4
SPG7 mutations can present with various movement disorders including parkinsonism, dystonia, tremor, and ataxia
PMID: 38035585
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
Autosomal recessive spastic paraplegia type 7Open Targets
0.84Strong
hereditary spastic paraplegia 7Open Targets
0.81Strong
hereditary spastic paraplegiaOpen Targets
0.58Moderate
genetic disorderOpen Targets
0.53Moderate
Spastic paraplegiaOpen Targets
0.51Moderate
spastic ataxiaOpen Targets
0.50Moderate
hereditary ataxiaOpen Targets
0.50Moderate
Retinal dystrophyOpen Targets
0.49Moderate
Gait ataxiaOpen Targets
0.46Moderate
smoking initiationOpen Targets
0.43Moderate
Spastic paraparesisOpen Targets
0.43Moderate
Cerebral cortical atrophyOpen Targets
0.43Moderate
DysarthriaOpen Targets
0.43Moderate
mitochondrial diseaseOpen Targets
0.42Moderate
Sensorimotor neuropathyOpen Targets
0.42Moderate
skin cancerOpen Targets
0.41Moderate
hereditary sensory and autonomic neuropathy with spastic paraplegiaOpen Targets
0.38Weak
optic atrophyOpen Targets
0.38Weak
Primary lateral sclerosisOpen Targets
0.37Weak
autosomal dominant optic atrophyOpen Targets
0.37Weak
Spastic paraplegia 7, autosomal recessiveUniProt
Pathogenic Variants187
NM_003119.4(SPG7):c.1045G>A (p.Gly349Ser)Pathogenic
Hereditary spastic paraplegia 7|not provided|Hereditary spastic paraplegia|Inborn genetic diseases|SPG7-related disorder|Retinal dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 349
NM_003119.4(SPG7):c.1672A>T (p.Lys558Ter)Pathogenic
Hereditary spastic paraplegia 7|not provided|Mitochondrial disease|Hereditary spastic paraplegia|SPG7-related disorder|Inborn genetic diseases|Hereditary ataxia
β˜…β˜…β˜†β˜†2026β†’ Residue 558
NM_003119.4(SPG7):c.233T>A (p.Leu78Ter)Pathogenic
Hereditary spastic paraplegia 7|not provided|Proximal spinal muscular atrophy|Hereditary spastic paraplegia|SPG7-related disorder|Retinal dystrophy|Hereditary ataxia
β˜…β˜…β˜†β˜†2026β†’ Residue 78
NM_003119.4(SPG7):c.1369C>T (p.Arg457Ter)Pathogenic
not provided|Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025β†’ Residue 457
NM_003119.4(SPG7):c.2271del (p.Met757fs)Pathogenic
Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025β†’ Residue 757
NM_003119.4(SPG7):c.2228T>C (p.Ile743Thr)Pathogenic
not provided|Hereditary spastic paraplegia 7|Spastic ataxia|Hereditary spastic paraplegia|SPG7-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 743
NM_003119.4(SPG7):c.1715C>T (p.Ala572Val)Pathogenic
Hereditary spastic paraplegia 7|not provided|Hereditary spastic paraplegia|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 572
NM_003119.4(SPG7):c.1937-2A>GPathogenic
Hereditary spastic paraplegia 7|not provided
β˜…β˜…β˜†β˜†2025
NM_003119.4(SPG7):c.1053dup (p.Gly352fs)Pathogenic
Hereditary spastic paraplegia 7|not provided|Hereditary spastic paraplegia|SPG7-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 352
NM_003119.4(SPG7):c.1049_1077del (p.Pro350fs)Pathogenic
Hereditary spastic paraplegia 7|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 350
NM_003119.4(SPG7):c.1192C>T (p.Arg398Ter)Pathogenic
not provided|Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025β†’ Residue 398
NM_003119.4(SPG7):c.376+1G>TPathogenic
Hereditary spastic paraplegia 7|not provided|Early-onset progressive neurodegeneration-blindness-ataxia-spasticity syndrome
β˜…β˜…β˜†β˜†2025
NM_003119.4(SPG7):c.415C>T (p.Arg139Ter)Pathogenic
Hereditary spastic paraplegia 7|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 139
NM_003119.4(SPG7):c.2001G>A (p.Met667Ile)Likely pathogenic
Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025β†’ Residue 667
NM_003119.4(SPG7):c.739C>T (p.Arg247Ter)Pathogenic
Hereditary spastic paraplegia 7|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 247
NM_003119.4(SPG7):c.1519C>T (p.Gln507Ter)Pathogenic
Hereditary spastic paraplegia 7|Hereditary spastic paraplegia
β˜…β˜…β˜†β˜†2025β†’ Residue 507
NM_003119.4(SPG7):c.473_474del (p.Leu158fs)Pathogenic
Hereditary spastic paraplegia 7|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 158
NM_003119.4(SPG7):c.958G>T (p.Glu320Ter)Pathogenic
Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025β†’ Residue 320
NM_003119.4(SPG7):c.1552+1G>TPathogenic
Hereditary spastic paraplegia 7|not provided|Hereditary spastic paraplegia|Cervical cancer
β˜…β˜…β˜†β˜†2025
NM_003119.4(SPG7):c.1939delPathogenic
not provided|Hereditary spastic paraplegia 7
β˜…β˜…β˜†β˜†2025
View on ClinVar β†—
Related Genes
MRPL22Protein interaction100%MRPL16Protein interaction100%MRPS15Protein interaction100%MRPL19Protein interaction100%MRPS9Protein interaction100%MRPL17Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
96%
Liver
95%
Heart
83%
Lung
60%
Brain
36%
Gene Interaction Network
Click a node to explore
SPG7MRPL22MRPL16MRPS15MRPL19MRPS9MRPL17
PROTEIN STRUCTURE
Preparing viewer…
PDB2QZ4 Β· 2.22 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.55LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.30 [1.10–1.55]
RankingsWhere SPG7 stands among ~20K protein-coding genes
  • #4,814of 20,598
    Most Researched100 Β· top quartile
  • #376of 5,498
    Most Pathogenic Variants187 Β· top 10%
  • #15,426of 17,882
    Most Constrained (LOEUF)1.55
Genes detectedSPG7
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Prohibitin 1 regulates mtDNA release and downstream inflammatory responses.
PMID: 36245295
EMBO J Β· 2022
1.00
2
NGS in Hereditary Ataxia: When Rare Becomes Frequent.
PMID: 34445196
Int J Mol Sci Β· 2021
0.90
3
Clinical and genetic spectra of 1550 index patients with hereditary spastic paraplegia.
PMID: 34983064
Brain Β· 2022
0.80
4
Hereditary spastic paraplegia: clinico-pathologic features and emerging molecular mechanisms.
PMID: 23897027
Acta Neuropathol Β· 2013
0.70
5
Mitochondria.
PMID: 12933917
J Neurol Neurosurg Psychiatry Β· 2003
0.60