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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SPINK9
serine peptidase inhibitor Kazal type 9
Chromosome 5 · 5q32
NCBI Gene: 643394Ensembl: ENSG00000204909.8HGNC: HGNC:32951UniProt: D6RJC5
8PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
serine-type endopeptidase inhibitor activityprotein bindingnegative regulation of proteolysisextracellular regionneurodegenerative diseaseasthmalower respiratory tract diseasechronic obstructive pulmonary disease
✦AI Summary

SPINK9 (serine peptidase inhibitor Kazal type 9) is a skin-specific Kazal-type serine protease inhibitor with dual functions in cutaneous homeostasis and innate immunity. Primary function: SPINK9 selectively inhibits kallikrein-related peptidase 5 (KLK5) with high specificity (Ki ~65 nM), playing a regulatory role in skin desquamation 1. The inhibitor is predominantly expressed in palmo-plantar epidermis, particularly in the stratum corneum and stratum granulosum 2. Mechanism: SPINK9's reactive loop (residues 48-49) inserts into KLK5's binding pocket with pH-dependent efficiency, explaining enhanced inhibition at physiological skin pH 3. Beyond protease inhibition, SPINK9 functions as an antimicrobial peptide, selectively killing Escherichia coli through intracellular interactions with bacterial chaperone SKP 4. SPINK9 also stimulates keratinocyte migration via purinergic receptor-mediated EGFR transactivation and metalloprotease activation 5. Disease relevance: SPINK9 is significantly upregulated in type 1 diabetes complications including neuropathy and ketoacidosis 6, and identified as a prognostic gene in non-smoking head and neck squamous cell carcinoma 7. Clinical significance: SPINK9 represents a multifunctional epidermal peptide maintaining both physical and immunological skin barriers.

Sources cited
1
SPINK9 is a skin-specific KLK5-selective inhibitor strongly expressed in palmar epidermis with Ki of 65 nM
PMID: 19194479
2
SPINK9 (LEKTI-2) purified from stratum corneum specifically inhibits KLK5 and is localized to stratum granulosum/corneum
PMID: 19190773
3
SPINK9 reactive loop residues 48-49 mediate KLK5 inhibition with pH-dependent efficiency enhanced at skin pH
PMID: 22505519
4
SPINK9 variants selectively kill E. coli through intracellular entry and interaction with bacterial chaperone SKP
PMID: 30468739
5
SPINK9 stimulates keratinocyte migration via purinergic receptor activation and EGFR transactivation
PMID: 24441102
6
SPINK9 is significantly upregulated in type 1 diabetes complications including neuropathy, ketoacidosis, and PCOS
PMID: 36175575
7
SPINK9 is identified as a prognostic gene in non-smoking head and neck squamous cell carcinoma
PMID: 36882550
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.33Weak
asthmaOpen Targets
0.13Weak
lower respiratory tract diseaseOpen Targets
0.04Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.03Suggestive
Abnormal erythrocyte morphologyOpen Targets
0.03Suggestive
chronic lung diseaseOpen Targets
0.03Suggestive
acute pancreatitisOpen Targets
0.02Suggestive
type 2 diabetes mellitusOpen Targets
0.02Suggestive
squamous cell carcinomaOpen Targets
0.02Suggestive
actinic keratosisOpen Targets
0.02Suggestive
neurodermatitisOpen Targets
0.02Suggestive
diabetes mellitusOpen Targets
0.02Suggestive
diabetic neuropathyOpen Targets
0.02Suggestive
Chronic Obstructive AsthmaOpen Targets
0.02Suggestive
chronic rhinosinusitisOpen Targets
0.02Suggestive
type 1 diabetes mellitusOpen Targets
0.02Suggestive
polycystic ovary syndromeOpen Targets
0.01Suggestive
hyperlipidemiaOpen Targets
0.01Suggestive
hypothyroidismOpen Targets
0.01Suggestive
neuropathyOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CSTBShared pathway100%TM4SF20Shared pathway100%SPINK6Shared pathway100%KLK8Protein interaction99%KLK5Protein interaction99%SPINK14Protein interaction83%
Tissue Expression6 tissues
Liver
100%
Ovary
100%
Lung
61%
Heart
56%
Brain
14%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SPINK9CSTBTM4SF20SPINK6KLK8KLK5SPINK14
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q5DT21
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.93LoF Tolerant
pLIⓘ
0.54Intermediate
Observed/Expected LoF0.30 [0.12–0.93]
RankingsWhere SPINK9 stands among ~20K protein-coding genes
  • #17,722of 20,598
    Most Researched8
  • #8,582of 17,882
    Most Constrained (LOEUF)0.93
Genes detectedSPINK9
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Skin-Derived SPINK9 Kills Escherichia coli.
PMID: 30468739
J Invest Dermatol · 2019
1.00
2
Identification of novel differentially expressed genes in type 1 diabetes mellitus complications using transcriptomic profiling of UAE patients: a multicenter study.
PMID: 36175575
Sci Rep · 2022
0.90
3
SPINK9: a selective, skin-specific Kazal-type serine protease inhibitor.
PMID: 19194479
J Invest Dermatol · 2009
0.80
4
Special transcriptome landscape and molecular prognostic signature of non-smoking head and neck cancer patients.
PMID: 36882550
Funct Integr Genomics · 2023
0.70
5
Characterization of SPINK9, a KLK5-specific inhibitor expressed in palmo-plantar epidermis.
PMID: 22505519
Biol Chem · 2012
0.60