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GeneE
50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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TCF7L2
transcription factor 7 like 2
Chromosome 10 Β· 10q25.2-q25.3
NCBI Gene: 6934Ensembl: ENSG00000148737.18HGNC: HGNC:11641UniProt: A0A0A0MTL7
854PubMed Papers
21Diseases
0Drugs
13Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Highly Studied
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
positive regulation of protein localization to nucleustranscription cis-regulatory region bindingRNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription factor activity, RNA polymerase II-specifictype 2 diabetes mellituscolorectal adenocarcinomaprostate carcinomadiabetes mellitus
✦AI Summary

TCF7L2 (transcription factor 7 like 2) is a key transcription factor that functions as both a transcriptional activator and repressor in the canonical Wnt signaling pathway 1. The protein acts as a repressor in the absence of Ξ²-catenin (CTNNB1) and as an activator in its presence, modulating expression of target genes including MYC by binding to specific DNA sequences 2. TCF7L2 plays critical roles in metabolic regulation, particularly glucose homeostasis and amino acid metabolism, with liver-specific deletion disrupting hepatic zonation and glutamine metabolism 3. The gene harbors the strongest genetic association with type 2 diabetes risk identified to date, with variants consistently replicated across diverse populations 1. Beyond diabetes, TCF7L2 contributes to cancer biology, promoting anoikis resistance and metastasis in gastric cancer through transcriptional activation of PLAUR 4. Meta-analyses have revealed significant associations between TCF7L2 polymorphisms and increased susceptibility to breast, prostate, and colon cancers 56. In colorectal cancer, NOTCH2 directly activates TCF7L2 transcription, which then regulates Wnt target genes including MYC, JUN, and CCND1/2 2. The gene also shows associations with diabetic retinopathy risk in certain populations 7.

Sources cited
1
TCF7L2 is the most potent locus for type 2 diabetes risk and functions in Wnt signaling pathway
PMID: 34016596
2
TCF7L2 promotes anoikis resistance and metastasis in gastric cancer by transcriptionally activating PLAUR
PMID: 35864968
3
Liver-specific TCF7L2 deletion disrupts hepatic zonation and glutamine metabolism
PMID: 40675550
4
TCF7L2 polymorphisms are associated with increased breast cancer susceptibility
PMID: 25867435
5
Meta-analysis shows TCF7L2 polymorphism associations with breast, prostate, and colon cancer risk
PMID: 23951231
6
NOTCH2 directly activates TCF7L2 transcription which regulates Wnt target genes in colorectal cancer
PMID: 39601111
7
TCF7L2 gene polymorphisms show associations with diabetic retinopathy risk
PMID: 35677638
Disease Associationsβ“˜21
type 2 diabetes mellitusOpen Targets
0.68Moderate
colorectal adenocarcinomaOpen Targets
0.61Moderate
prostate carcinomaOpen Targets
0.59Moderate
diabetes mellitusOpen Targets
0.58Moderate
myopiaOpen Targets
0.55Moderate
breast carcinomaOpen Targets
0.54Moderate
type 1 diabetes mellitusOpen Targets
0.53Moderate
diabetic retinopathyOpen Targets
0.52Moderate
colon adenocarcinomaOpen Targets
0.52Moderate
gestational diabetesOpen Targets
0.52Moderate
diabetic eye diseaseOpen Targets
0.52Moderate
coronary artery diseaseOpen Targets
0.51Moderate
chronic kidney diseaseOpen Targets
0.51Moderate
colorectal cancerOpen Targets
0.51Moderate
type 2 diabetes nephropathyOpen Targets
0.50Moderate
neurodegenerative diseaseOpen Targets
0.50Moderate
obesityOpen Targets
0.50Moderate
HypercholesterolemiaOpen Targets
0.49Moderate
metabolic syndromeOpen Targets
0.49Moderate
diabetic neuropathyOpen Targets
0.49Moderate
Type 2 diabetes mellitusUniProt
Pathogenic Variants13
NM_001367943.1(TCF7L2):c.1258C>T (p.Arg420Trp)Pathogenic
not provided|TCF7L2-related neurodevelopmental disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 420
NM_001367943.1(TCF7L2):c.1144C>T (p.Gln382Ter)Pathogenic
Autism|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 382
NM_001367943.1(TCF7L2):c.1231A>G (p.Met411Val)Likely pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2025β†’ Residue 411
NM_001367943.1(TCF7L2):c.1256C>T (p.Ala419Val)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 419
NM_001367943.1(TCF7L2):c.1161+1G>ALikely pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2024
NM_001367943.1(TCF7L2):c.733_748delinsTCCGC (p.Leu245fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 245
NM_001367943.1(TCF7L2):c.1219C>T (p.Arg407Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 407
NM_001367943.1(TCF7L2):c.553-1G>APathogenic
not provided
β˜…β˜†β˜†β˜†2023
NM_001367943.1(TCF7L2):c.553-3538_685+1239delLikely pathogenic
TCF7L2-related neurodevelopmental disorder
β˜…β˜†β˜†β˜†2022
NM_001367943.1(TCF7L2):c.755_762del (p.Gln252fs)Pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2022β†’ Residue 252
NM_001367943.1(TCF7L2):c.1197del (p.Tyr400fs)Likely pathogenic
Neurodevelopmental abnormality
β˜…β˜†β˜†β˜†2021β†’ Residue 400
NM_001367943.1(TCF7L2):c.1180G>T (p.Glu394Ter)Pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2020β†’ Residue 394
NM_001367943.1(TCF7L2):c.723del (p.Tyr242fs)Likely pathogenic
Neurodevelopmental delay
β˜…β˜†β˜†β˜†β†’ Residue 242
View on ClinVar β†—
Related Genes
PYGO2Protein interaction100%CDKN2AProtein interaction100%NLKProtein interaction99%BCL9Protein interaction98%CTNNB1Protein interaction98%HNF4AProtein interaction98%
Tissue Expression6 tissues
Liver
100%
Ovary
98%
Lung
57%
Brain
49%
Heart
44%
Bone Marrow
43%
Gene Interaction Network
Click a node to explore
TCF7L2PYGO2CDKN2ANLKBCL9CTNNB1HNF4A
PROTEIN STRUCTURE
Preparing viewer…
PDB1JDH Β· 1.90 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.47Moderately Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.33 [0.24–0.47]
RankingsWhere TCF7L2 stands among ~20K protein-coding genes
  • #214of 20,598
    Most Researched854 Β· top 5%
  • #2,556of 5,498
    Most Pathogenic Variants13
  • #2,735of 17,882
    Most Constrained (LOEUF)0.47 Β· top quartile
Genes detectedTCF7L2
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
The Role of
PMID: 34016596
Diabetes Β· 2021
1.00
2
TCF7L2 promotes anoikis resistance and metastasis of gastric cancer by transcriptionally activating PLAUR.
PMID: 35864968
Int J Biol Sci Β· 2022
0.90
3
Single-cell analysis reveals that TCF7L2 facilitates the progression of ccRCC via tumor-associated macrophages.
PMID: 39366533
Cell Signal Β· 2024
0.84
4
Associations Between TCF7L2, PPARΞ³, and KCNJ11 Genotypes and Insulin Response to an Oral Glucose Tolerance Test: A Systematic Review.
PMID: 39828593
Mol Nutr Food Res Β· 2025
0.82
5
The diabetes gene Tcf7l2 organizes gene expression in the liver and regulates amino acid metabolism.
PMID: 40675550
Mol Metab Β· 2025
0.80