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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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TMEM231
transmembrane protein 231
Chromosome 16 Β· 16q23.1
NCBI Gene: 79583Ensembl: ENSG00000205084.13HGNC: HGNC:37234UniProt: Q9H6L2
27PubMed Papers
22Diseases
0Drugs
53Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingsmoothened signaling pathwayregulation of protein localizationcilium assemblyJoubert syndrome 20Meckel syndrome, type 11Meckel syndromeJoubert syndrome with oculorenal defect
✦AI Summary

TMEM231 is a transmembrane protein essential for ciliary transition zone organization and function. As a core component of the MKS (Meckel-Gruber syndrome) complex, TMEM231 localizes to the transition zone between the basal body and axoneme, where it works cooperatively with B9D1 and CC2D2A to form a diffusion barrier 1. This barrier maintains the cilium as a compartmentalized signaling organelle by restricting plasma membrane protein diffusion into the ciliary membrane 12. TMEM231 is critical for ciliogenesis and sonic hedgehog signaling; disruption impairs localization of signaling receptors like Arl13b and Inpp5e to cilia 2. Pathogenic TMEM231 variants cause ciliopathies with overlapping phenotypes, including Meckel syndrome (MKS) and Joubert syndrome (JBTS) 34. MKS manifests as a severe perinatally-fatal disorder with polycystic kidneys, occipital encephalocele, polydactyly, liver fibrosis, and CNS malformations 3. JBTS presents with cerebellar vermis hypoplasia, oculomotor apraxia, and variable renal/ocular involvement 4. Mutations range from splice-site variants causing exon skipping to missense changes, with genotype-phenotype correlation observed within families 35. Clinical diagnosis requires genetic testing, with implications for genetic counseling and prenatal diagnosis in affected families.

Sources cited
1
TMEM231 is a transmembrane component of the ciliary transition zone complex that forms a diffusion barrier to maintain cilia as a compartmentalized signaling organelle
PMID: 22179047
2
TMEM231 mutations disrupt localization of ciliary proteins like Arl13b and Inpp5e, causing MKS and orofaciodigital syndrome phenotypes
PMID: 25869670
3
Splice site variants in TMEM231 cause Meckel syndrome with absent primary cilia and multiorgan dysfunction
PMID: 37736303
4
Compound heterozygous TMEM231 mutations cause Joubert syndrome with severe neurological phenotype and variable polydactyly, retinopathy, and renal cysts
PMID: 23012439
5
TMEM231 mutations show complex allelism, with gene conversion events and missense variants causing both Joubert and Meckel-Gruber syndromes in the same family
PMID: 27449316
6
Novel TMEM231 missense variants are associated with fetal cerebellar vermis hypoplasia and polydactyly
PMID: 34912761
Disease Associationsβ“˜22
Joubert syndrome 20Open Targets
0.75Strong
Meckel syndrome, type 11Open Targets
0.71Strong
Meckel syndromeOpen Targets
0.65Moderate
Joubert syndrome with oculorenal defectOpen Targets
0.62Moderate
Joubert syndrome and related disordersOpen Targets
0.52Moderate
ciliopathyOpen Targets
0.52Moderate
Joubert syndrome with ocular defectOpen Targets
0.46Moderate
Joubert syndromeOpen Targets
0.40Moderate
orofaciodigital syndrome type 6Open Targets
0.37Weak
Joubert syndrome with orofaciodigital defectOpen Targets
0.37Weak
Orofaciodigital syndrome type 3Open Targets
0.34Weak
genetic disorderOpen Targets
0.34Weak
orofaciodigital syndrome IIIOpen Targets
0.34Weak
congenital anomaly of kidney and urinary tractOpen Targets
0.26Weak
congenital hydronephrosisOpen Targets
0.26Weak
DiarrheaOpen Targets
0.16Weak
response to darapladibOpen Targets
0.14Weak
Syndactyly type 2Open Targets
0.05Suggestive
syndactyly type 4Open Targets
0.05Suggestive
smoking initiationOpen Targets
0.05Suggestive
Joubert syndrome 20UniProt
Meckel syndrome 11UniProt
Pathogenic Variants53
NM_001077418.3(TMEM231):c.139+47C>APathogenic
Meckel syndrome, type 11;Joubert syndrome 20|Joubert syndrome and related disorders|Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2026
NM_001077418.3(TMEM231):c.574C>T (p.Arg192Ter)Pathogenic
not provided|Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜…β˜†β˜†2026β†’ Residue 192
NM_001077418.3(TMEM231):c.582+1G>APathogenic
Meckel syndrome, type 11;Joubert syndrome 20|Squamous cell carcinoma of the head and neck|TMEM231-related disorder|Ciliopathy|Pancreatic adenocarcinoma
β˜…β˜…β˜†β˜†2026
NM_001077416.2(TMEM231):c.74T>A (p.Met25Lys)Pathogenic
Joubert syndrome 20|Joubert syndrome 20;Meckel syndrome, type 11|Joubert syndrome and related disorders
β˜…β˜…β˜†β˜†2025β†’ Residue 25
NM_001077418.3(TMEM231):c.139+39_139+40delPathogenic
Joubert syndrome 20;Meckel syndrome, type 11|not provided
β˜…β˜…β˜†β˜†2025
NM_001077418.3(TMEM231):c.664G>A (p.Val222Ile)Pathogenic
Meckel syndrome, type 11|Meckel-Gruber syndrome|not provided|TMEM231-related disorder|Joubert syndrome 20|Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024β†’ Residue 222
NM_001077418.3(TMEM231):c.438+1G>APathogenic
Meckel syndrome, type 11|Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024
NM_001077418.3(TMEM231):c.438+1G>CPathogenic
Joubert syndrome and related disorders|Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024
NM_001077418.3(TMEM231):c.284del (p.Asp95fs)Pathogenic
Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024β†’ Residue 95
NM_001077418.3(TMEM231):c.544C>T (p.Gln182Ter)Pathogenic
not provided|Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024β†’ Residue 182
NM_001077418.3(TMEM231):c.247T>G (p.Trp83Gly)Likely pathogenic
Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2024β†’ Residue 83
NM_001077418.3(TMEM231):c.248G>A (p.Trp83Ter)Pathogenic
Joubert syndrome 20|Joubert syndrome and related disorders|Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜…β˜†β˜†2023β†’ Residue 83
NM_001077418.3(TMEM231):c.261dup (p.Ala88fs)Pathogenic
Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜†β˜†β˜†2026β†’ Residue 88
NM_001077418.3(TMEM231):c.169del (p.Glu57fs)Pathogenic
Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜†β˜†β˜†2026β†’ Residue 57
NM_001077418.3(TMEM231):c.140-9_140-8delPathogenic
Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜†β˜†β˜†2025
NM_001077418.3(TMEM231):c.505del (p.Gln169fs)Pathogenic
Joubert syndrome and related disorders
β˜…β˜†β˜†β˜†2025β†’ Residue 169
NM_001077418.3(TMEM231):c.513C>A (p.Tyr171Ter)Pathogenic
Joubert syndrome 20;Meckel syndrome, type 11
β˜…β˜†β˜†β˜†2025β†’ Residue 171
NM_001077418.3(TMEM231):c.308C>A (p.Ser103Ter)Pathogenic
Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜†β˜†β˜†2025β†’ Residue 103
NM_001077418.3(TMEM231):c.439-33_538delLikely pathogenic
Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜†β˜†β˜†2025
NM_001077418.3(TMEM231):c.535C>T (p.Gln179Ter)Pathogenic
Meckel syndrome, type 11;Joubert syndrome 20
β˜…β˜†β˜†β˜†2025β†’ Residue 179
View on ClinVar β†—
Related Genes
NPHP1Protein interaction100%RPGRIP1LProtein interaction100%TMEM216Protein interaction100%AHI1Protein interaction100%CEP290Protein interaction97%TMEM107Protein interaction94%
Tissue Expression6 tissues
Ovary
100%
Brain
94%
Heart
70%
Lung
50%
Bone Marrow
44%
Liver
22%
Gene Interaction Network
Click a node to explore
TMEM231NPHP1RPGRIP1LTMEM216AHI1CEP290TMEM107
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q9H6L2
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.41LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.01 [0.73–1.41]
RankingsWhere TMEM231 stands among ~20K protein-coding genes
  • #12,695of 20,598
    Most Researched27
  • #1,284of 5,498
    Most Pathogenic Variants53 Β· top quartile
  • #14,578of 17,882
    Most Constrained (LOEUF)1.41
Genes detectedTMEM231
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
PMID: 20301500
1.00
2
Identification of novel
PMID: 37736303
Front Genet Β· 2023
0.90
3
TMEM231 Gene Conversion Associated with Joubert and Meckel-Gruber Syndromes in the Same Family.
PMID: 27449316
Hum Mutat Β· 2016
0.80
4
TMEM231, mutated in orofaciodigital and Meckel syndromes, organizes the ciliary transition zone.
PMID: 25869670
J Cell Biol Β· 2015
0.70
5
Long-read nanopore sequencing resolves a TMEM231 gene conversion event causing Meckel-Gruber syndrome.
PMID: 31663672
Hum Mutat Β· 2020
0.60