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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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TMSB4Y
thymosin beta 4 Y-linked
Chromosome Y · Yq11.221
NCBI Gene: 9087Ensembl: ENSG00000154620.6HGNC: HGNC:11882UniProt: O14604
19PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingregulation of cell migrationprotein sequestering activitycytosolbreast carcinomacongenital factor X deficiencycongenital factor VII deficiencyleft ventricular noncompaction
✦AI Summary

TMSB4Y (thymosin beta 4 Y-linked) is a Y chrY-encoded gene that functions as a tumor suppressor with roles in cytoskeletal organization and cell cycle regulation. The protein directly interacts with β-actin and sequesters actin monomers, affecting cytoskeletal dynamics 1. In male esophageal squamous cell carcinoma, TMSB4Y inhibits proliferation, invasion, and metastasis by disrupting PAICS octamer formation, which impairs purine synthesis and AMPK signaling, ultimately suppressing sphingomyelin metabolism 2. TMSB4Y expression in breast epithelial cells results in aberrant cellular morphology, reduced proliferation, and decreased metaphase cell fraction 1. The gene shows differential expression patterns across various cancers, including prostate cancer and male breast cancer, where clonal loss occurs in ~16% of cases 31. TMSB4Y has been identified as a biomarker in multiple disease contexts, including ankylosing spondylitis, Alzheimer's disease, major depressive disorder, lymphoma radiotherapy resistance, and proliferative diabetic retinopathy 4567. Additionally, TMSB4Y encodes a minor histocompatibility antigen recognized by CD8+ T cells in transplant settings, highlighting its immunological significance 8.

Sources cited
1
TMSB4Y inhibits esophageal cancer progression through PAICS interaction and sphingomyelin metabolism regulation
PMID: 39443723
2
TMSB4Y functions as tumor suppressor, interacts with β-actin, and is lost in male breast cancer
PMID: 26702755
3
TMSB4Y shows differential expression in prostate cancer tissues and cell lines
PMID: 11257712
4
TMSB4Y identified as biomarker distinguishing male and female ankylosing spondylitis patients
PMID: 38965390
5
TMSB4Y is differentially expressed in Alzheimer's disease and major depressive disorder
PMID: 36928034
6
TMSB4Y encodes HLA-A*3303-restricted minor histocompatibility antigen
PMID: 15557202
7
TMSB4Y identified as lymphoma radiotherapy-resistant gene
PMID: 36743888
8
TMSB4Y identified as biomarker in proliferative diabetic retinopathy
PMID: 40331545
Disease Associationsⓘ20
breast carcinomaOpen Targets
0.05Suggestive
congenital factor X deficiencyOpen Targets
0.05Suggestive
congenital factor VII deficiencyOpen Targets
0.05Suggestive
left ventricular noncompactionOpen Targets
0.05Suggestive
Hereditary cerebral hemorrhage with amyloidosis, Piedmont typeOpen Targets
0.04Suggestive
Hereditary cerebral hemorrhage with amyloidosisOpen Targets
0.04Suggestive
factor VII deficiencyOpen Targets
0.04Suggestive
hypertrophic cardiomyopathyOpen Targets
0.04Suggestive
Familial cerebral saccular aneurysmOpen Targets
0.04Suggestive
Congenital factor II deficiencyOpen Targets
0.04Suggestive
Congenital alpha2 antiplasmin deficiencyOpen Targets
0.04Suggestive
hemophilia AOpen Targets
0.04Suggestive
aneurysm, intracranial berry, 12Open Targets
0.04Suggestive
congenital factor V deficiencyOpen Targets
0.04Suggestive
factor X deficiencyOpen Targets
0.04Suggestive
congenital factor XIII deficiencyOpen Targets
0.04Suggestive
congenital afibrinogenemiaOpen Targets
0.04Suggestive
Familial afibrinogenemiaOpen Targets
0.04Suggestive
moderately severe hemophilia AOpen Targets
0.04Suggestive
congenital plasminogen activator inhibitor type 1 deficiencyOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O14604
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
6.31LoF Tolerant
pLIⓘ
0.05Tolerant
Observed/Expected LoF2.00 [0.82–6.31]
RankingsWhere TMSB4Y stands among ~20K protein-coding genes
  • #14,579of 20,598
    Most Researched19
  • #17,881of 17,882
    Most Constrained (LOEUF)6.31
Genes detectedTMSB4Y
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
TMSB4Y restrains sphingomyelin synthesis via de novo purine synthesis to exert a tumor suppressor function in male esophageal squamous cell carcinoma.
PMID: 39443723
Oncogene · 2024
1.00
2
Expression analysis of Y chromosome genes in human prostate cancer.
PMID: 11257712
J Urol · 2001
0.90
3
Identification of sex-specific biomarkers related to programmed cell death and analysis of immune cells in ankylosing spondylitis.
PMID: 38965390
Sci Rep · 2024
0.80
4
Parallel molecular alteration between Alzheimer's disease and major depressive disorder in the human brain dorsolateral prefrontal cortex: an insight from gene expression and methylation profile analyses.
PMID: 36928034
Genes Genet Syst · 2023
0.70
5
A novel HLA-A*3303-restricted minor histocompatibility antigen encoded by an unconventional open reading frame of human TMSB4Y gene.
PMID: 15557202
J Immunol · 2004
0.60