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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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TRIM39
tripartite motif containing 39
Chromosome 6 · 6p22.1
NCBI Gene: 56658Ensembl: ENSG00000204599.17HGNC: HGNC:10065UniProt: A0A024RCP5
45PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
negative regulation of ubiquitin-dependent protein catabolic processpositive regulation of apoptotic signaling pathwaymitochondrioncytosol
✦AI Summary

TRIM39 is an E3 ubiquitin ligase that functions as a critical regulator of cell cycle control, DNA damage responses, and inflammatory signaling. Its primary function is stabilizing p21/CDKN1A by competing with the CRL4(Cdt2) E3 ligase complex for p21 binding, thereby preventing p21 ubiquitination and degradation 1. This stabilization allows TRIM39 to regulate G1/S transition and enforce DNA damage-induced G2 arrest, with p21 serving as the crucial downstream effector 1. Beyond cell cycle control, TRIM39 negatively regulates canonical NF-κB signaling through stabilization of Cactin in an ubiquitination-independent manner 2. TRIM39 also mediates SUMOylation of ESR1, enhancing E2-ESR1 signaling 3, and promotes autophagic flux by inhibiting Rab7 ubiquitination 4. Dysregulation of TRIM39 has significant disease relevance across multiple cancer types. TRIM39 upregulation associates with poor prognosis in colorectal cancer 4 and ER+ breast cancer, where it independently predicts short disease-free survival 5. Conversely, genetic variants near TRIM39 loci provide protection against nasopharyngeal carcinoma 6, and TRIM39 upregulation mediates tumor suppressive senescence in ovarian cancer through p21 stabilization 7. TRIM39 also modulates renal fibrosis progression 8, indicating broader pathophysiological relevance beyond malignancy.

Sources cited
1
TRIM39 stabilizes p21/CDKN1A by preventing CRL4(Cdt2)-mediated ubiquitination and proteasomal degradation; regulates G1/S transition and DNA damage-induced G2 arrest
PMID: 23213251
2
TRIM39 negatively regulates canonical NF-κB signaling through stabilization of Cactin in an ubiquitination-independent manner
PMID: 26363554
3
TRIM39 mediates SUMOylation of ESR1 to enhance E2-ESR1 signaling and alleviates aortic dissection progression
PMID: 40921118
4
TRIM39 deficiency inhibits colorectal cancer progression and autophagic flux through suppressing Rab7 activity; TRIM39 upregulation associates with poor prognosis in CRC
PMID: 33846303
5
TRIM39 is an independent prognostic factor for poor disease-free survival in ER+ breast cancer; promotes cell cycle progression through upregulation of cell cycle-related genes
PMID: 35174936
6
TRIM39 expression is diminished in ovarian cancer; TRIM39 overexpression increases p21 stability and promotes ovarian cancer cell senescence
PMID: 34643308
7
TRIM39 genetic variants provide protection against nasopharyngeal carcinoma; TRIM39 is an E3 ubiquitin ligase impacting innate immune responses
PMID: 33311639
8
TRIM39 is upregulated in renal fibrosis and promotes proteasomal degradation of PRDX3 through K48-linked ubiquitination, leading to ROS accumulation and fibrosis progression
PMID: 38195664
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
BBOX1Protein interaction87%TRIM17Protein interaction87%TRIM39-RPP21Protein interaction82%MOAP1Protein interaction80%CACTINProtein interaction78%UBE2D1Protein interaction70%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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TRIM39BBOX1TRIM17TRIM39-RPP21MOAP1CACTINUBE2D1
PROTEIN STRUCTURE
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PDB2DID · NMR
View on RCSB ↗
RankingsWhere TRIM39 stands among ~20K protein-coding genes
  • #9,539of 20,598
    Most Researched45
Genes detectedTRIM39
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Anti-oncogenic PTEN induces ovarian cancer cell senescence by targeting P21.
PMID: 34643308
Cell Biol Int · 2022
1.00
2
The E3 ubiquitin ligase TRIM39 modulates renal fibrosis induced by unilateral ureteral obstruction through regulating proteasomal degradation of PRDX3.
PMID: 38195664
Cell Death Discov · 2024
0.90
3
TRIM39 reinforces E2-ESR1 signaling through SUMOylation of ESR1 to hinder the progression of aortic dissection.
PMID: 40921118
Atherosclerosis · 2025
0.80
4
Nasopharyngeal carcinoma MHC region deep sequencing identifies HLA and novel non-HLA TRIM31 and TRIM39 loci.
PMID: 33311639
Commun Biol · 2020
0.70
5
TRIM39 deficiency inhibits tumor progression and autophagic flux in colorectal cancer via suppressing the activity of Rab7.
PMID: 33846303
Cell Death Dis · 2021
0.60