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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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TRMT61A
tRNA methyltransferase 61A
Chromosome 14 · 14q32.33
NCBI Gene: 115708Ensembl: ENSG00000166166.14HGNC: HGNC:23790UniProt: Q96FX7
41PubMed Papers
20Diseases
0Drugs
1Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingmRNA processingmRNA (adenine-N1-)-methyltransferase activitytRNA methylationneurodegenerative diseaseintelligencetype 2 diabetes mellitusCornelia de Lange syndrome
✦AI Summary

TRMT61A is the catalytic subunit of tRNA N1-methyladenosine (m1A) methyltransferase complex that catalyzes formation of m1A58 in initiator methionyl-tRNA 1. The enzyme also mediates m1A methylation of a small subset of mRNAs containing tRNA T-loop-like structures at low stoichiometries 2. TRMT61A functions with TRMT6 to stabilize the m1A methyltransferase complex 3. Clinically, TRMT61A exhibits oncogenic activity across multiple cancer types. In hepatocellular carcinoma, elevated m1A and TRMT6/TRMT61A expression correlate with poor survival, promoting liver cancer stem cell self-renewal through PPARδ-mediated cholesterol and Hedgehog signaling 4. In colorectal cancer, TRMT61A upregulation associates with poor prognosis and promotes tumorigenesis via m1A-dependent mRNA stability of ONECUT2, activating MAPK/ERK signaling 5. TRMT6-mediated tRNA m1A modification restricts histone synthesis and cell cycle progression in CRC 3. In bladder cancer, TRMT6/TRMT61A depletion reduces proliferation and stress resistance 6, while in head and neck squamous cell carcinoma, TRMT61A promotes MYC synthesis and PD-L1 upregulation, enabling immune escape 7. Beyond cancer, TRMT61A-mediated m1A protects against protein aggregation in neurodegenerative contexts and amyloidogenesis 89. These findings identify TRMT61A as a promising therapeutic target across multiple malignancies.

Sources cited
1
TRMT61A is the catalytic subunit of tRNA N1-methyladenosine (m1A) methyltransferase complex that catalyzes formation of m1A58 in initiator methionyl-tRNA .
PMID: 16043508
2
The enzyme also mediates m1A methylation of a small subset of mRNAs containing tRNA T-loop-like structures at low stoichiometries .
PMID: 29072297
3
TRMT61A functions with TRMT6 to stabilize the m1A methyltransferase complex .
PMID: 40461825
4
In hepatocellular carcinoma, elevated m1A and TRMT6/TRMT61A expression correlate with poor survival, promoting liver cancer stem cell self-renewal through PPARδ-mediated cholesterol and Hedgehog signaling .
PMID: 34728628
5
In colorectal cancer, TRMT61A upregulation associates with poor prognosis and promotes tumorigenesis via m1A-dependent mRNA stability of ONECUT2, activating MAPK/ERK signaling .
PMID: 41103012
6
In bladder cancer, TRMT6/TRMT61A depletion reduces proliferation and stress resistance , while in head and neck squamous cell carcinoma, TRMT61A promotes MYC synthesis and PD-L1 upregulation, enabling immune escape .
PMID: 38304034
7
In bladder cancer, TRMT6/TRMT61A depletion reduces proliferation and stress resistance , while in head and neck squamous cell carcinoma, TRMT61A promotes MYC synthesis and PD-L1 upregulation, enabling immune escape .
PMID: 38730256
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.46Moderate
intelligenceOpen Targets
0.28Weak
type 2 diabetes mellitusOpen Targets
0.27Weak
Cornelia de Lange syndromeOpen Targets
0.27Weak
major depressive disorderOpen Targets
0.27Weak
mental or behavioural disorderOpen Targets
0.26Weak
schizophreniaOpen Targets
0.24Weak
cardiac arrestOpen Targets
0.18Weak
partial epilepsyOpen Targets
0.10Weak
bladder diseaseOpen Targets
0.09Suggestive
health study participationOpen Targets
0.09Suggestive
hair colorOpen Targets
0.08Suggestive
radius fractureOpen Targets
0.08Suggestive
ulna fractureOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
hypertensionOpen Targets
0.07Suggestive
Abnormality of the skeletal systemOpen Targets
0.07Suggestive
essential hypertensionOpen Targets
0.06Suggestive
osteoarthritis, kneeOpen Targets
0.05Suggestive
attention deficit hyperactivity disorderOpen Targets
0.05Suggestive
Pathogenic Variants1
NM_152307.3(TRMT61A):c.665C>T (p.Ala222Val)Likely pathogenic
De Lange syndrome
★☆☆☆2024→ Residue 222
View on ClinVar ↗
Related Genes
ALKBH1Protein interaction100%WDR4Protein interaction100%FTSJ1Protein interaction100%TRMT5Protein interaction100%PUS1Protein interaction100%TSR1Protein interaction100%
Tissue Expression6 tissues
Ovary
100%
Liver
97%
Lung
76%
Brain
54%
Bone Marrow
53%
Heart
32%
Gene Interaction Network
Click a node to explore
TRMT61AALKBH1WDR4FTSJ1TRMT5PUS1TSR1
PROTEIN STRUCTURE
Preparing viewer…
PDB5CCB · 2.00 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.18LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.77 [0.51–1.18]
RankingsWhere TRMT61A stands among ~20K protein-coding genes
  • #10,104of 20,598
    Most Researched41
  • #5,163of 5,498
    Most Pathogenic Variants1
  • #12,414of 17,882
    Most Constrained (LOEUF)1.18
Genes detectedTRMT61A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
N
PMID: 34728628
Nat Commun · 2021
1.00
2
TRMT6-mediated tRNA m
PMID: 40461825
Nat Cancer · 2025
0.90
3
m
PMID: 37938769
Nature · 2023
0.80
4
Depletion of the m1A writer TRMT6/TRMT61A reduces proliferation and resistance against cellular stress in bladder cancer.
PMID: 38304034
Front Oncol · 2023
0.70
5
The m1A landscape on cytosolic and mitochondrial mRNA at single-base resolution.
PMID: 29072297
Nature · 2017
0.60