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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TRNAU1AP
tRNA selenocysteine 1 associated protein 1
Chromosome 1 · 1p35.3
NCBI Gene: 54952Ensembl: ENSG00000180098.10HGNC: HGNC:30813UniProt: Q9NX07
28PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcytoplasmRNA bindingtRNA bindingneurodegenerative diseaseplacenta praeviaalcohol drinkingsteatosis
✦AI Summary

TRNAU1AP (tRNA selenocysteine 1 associated protein 1), also known as SECp43, is a pivotal regulator of selenocysteine biosynthesis and incorporation into selenoproteins. Mechanistically, TRNAU1AP stabilizes the complex of SECISBP2, EEFSEC, and tRNA(Sec), facilitating cotranslational selenocysteine incorporation at UGA codons 1. The protein interacts with selenocysteyl-tRNA(Ser)Sec-EFsec complexes and promotes interactions between EFsec and SBP2, enhancing selenoprotein synthesis efficiency 1. Beyond its canonical selenoprotein function, TRNAU1AP exhibits broader cellular roles: it modulates alternative splicing of hundreds of endogenous genes 2 and participates in cell proliferation and migration through the PI3K/Akt signaling pathway 3. Functionally, TRNAU1AP knockdown reduces selenoprotein expression levels, impairing cell proliferation and migration in embryonic and trophoblast cells 3. Clinically, TRNAU1AP deficiency models demonstrate relevance to renal fibrosis pathogenesis, where selenium deficiency-induced reductions in TRNAU1AP expression correlate with elevated oxidative stress, mitochondrial dysfunction, and activation of the Wnt/β-catenin pathway 45. Additionally, TRNAU1AP fusion proteins have been identified in papillary thyroid carcinomas 6, suggesting potential oncogenic relevance.

Sources cited
1
SECp43/TRNAU1AP stabilizes SECISBP2, EEFSEC, and tRNA(Sec) complexes; interacts with selenocysteyl-tRNA-EFsec complex; enhances selenoprotein synthesis
PMID: 16508009
2
TRNAU1AP modulates alternative splicing of hundreds of endogenous splicing events
PMID: 38168984
3
Knockdown of TRNAU1AP reduces selenoprotein expression and inhibits cell proliferation and migration via PI3K/Akt pathway in embryonic cells
PMID: 29758194
4
TRNAU1AP deficiency leads to renal fibrosis and altered Wnt/β-catenin signaling pathway
PMID: 33895963
5
Selenium deficiency via TRNAU1AP knockdown induces renal injury and mitochondrial dysfunction
PMID: 32172502
6
TRNAU1AP-RCC1 fusion protein identified as somatic alteration in papillary thyroid carcinoma
PMID: 32065787
7
Alternative TRNAU1AP protein interacts with tropomyosin 4 in cell reprogramming and PKA signaling
PMID: 32324228
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.46Moderate
placenta praeviaOpen Targets
0.26Weak
alcohol drinkingOpen Targets
0.21Weak
steatosisOpen Targets
0.01Suggestive
psoriasisOpen Targets
0.01Suggestive
nail-patella syndromeOpen Targets
0.00Suggestive
neoplasmOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
colon adenocarcinomaOpen Targets
0.00Suggestive
colorectal adenocarcinomaOpen Targets
0.00Suggestive
Hereditary breast cancerOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
ovarian serous cystadenocarcinomaOpen Targets
0.00Suggestive
squamous cell lung carcinomaOpen Targets
0.00Suggestive
ThymomaOpen Targets
0.00Suggestive
urinary bladder cancerOpen Targets
0.00Suggestive
urinary bladder carcinomaOpen Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SECISBP2LShared pathway100%EEFSECShared pathway100%SECISBP2Protein interaction100%SF3B3Protein interaction100%SNRNP200Protein interaction100%SART1Protein interaction100%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
99%
Lung
98%
Brain
75%
Heart
74%
Liver
55%
Gene Interaction Network
Click a node to explore
TRNAU1APSECISBP2LEEFSECSECISBP2SF3B3SNRNP200SART1
PROTEIN STRUCTURE
Preparing viewer…
PDB2DHG · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.94LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.70 [0.52–0.94]
RankingsWhere TRNAU1AP stands among ~20K protein-coding genes
  • #12,474of 20,598
    Most Researched28
  • #8,772of 17,882
    Most Constrained (LOEUF)0.94
Genes detectedTRNAU1AP
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Large-scale evaluation of the ability of RNA-binding proteins to activate exon inclusion.
PMID: 38168984
Nat Biotechnol · 2024
1.00
2
Knockdown of Trnau1ap inhibits the proliferation and migration of NIH3T3, JEG-3 and Bewo cells via the PI3K/Akt signaling pathway.
PMID: 29758194
Biochem Biophys Res Commun · 2018
0.90
3
The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer.
PMID: 28977470
Nucleic Acids Res · 2017
0.80
4
Selenium Deficiency Leads to Changes in Renal Fibrosis Marker Proteins and Wnt/β-Catenin Signaling Pathway Components.
PMID: 33895963
Biol Trace Elem Res · 2022
0.70
5
Selenium Deficiency-Induced Damage and Altered Expression of Mitochondrial Biogenesis Markers in the Kidneys of Mice.
PMID: 32172502
Biol Trace Elem Res · 2021
0.60