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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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USP31
ubiquitin specific peptidase 31
Chromosome 16 · 16p12.2
NCBI Gene: 57478Ensembl: ENSG00000103404.16HGNC: HGNC:20060UniProt: Q70CQ4
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Protease
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cysteine-type deubiquitinase activitynucleuscysteine-type peptidase activityubiquitin-like protein peptidase activitytemporomandibular joint disordercircadian rhythm sleep disordersensorineural hearing lossSensorineural hearing impairment
✦AI Summary

USP31 (ubiquitin-specific peptidase 31) is a deubiquitinating enzyme that regulates protein stability through ubiquitin hydrolysis 1. The enzyme contains conserved ubiquitin hydrolase domains and is primarily expressed in testis and lung tissue 1. Mechanistically, USP31 functions as a deubiquitinase that stabilizes target proteins by removing ubiquitin modifications. Notably, USP31 specifically binds and deubiquitinates GPX4, a glutathione peroxidase involved in antioxidant defense and ferroptosis regulation 2. USP31 also stabilizes β-catenin in the Wnt signaling pathway 3 and E2F1 transcription factor 4, promoting their respective downstream signaling cascades. In disease contexts, USP31 demonstrates dual roles. In cardiovascular disease, macrophage-expressed USP31 promotes atherosclerosis development through NF-κB pathway activation 5. Conversely, in multiple cancer types including hepatocellular carcinoma, cervical cancer, gastric cancer, lung squamous cell carcinoma, and clear cell renal cell carcinoma, USP31 upregulation correlates with poor prognosis and enhanced tumor progression 26347. USP31 suppression increases cancer cell radiosensitivity by promoting ferroptosis 6. Clinically, USP31 represents a potential biomarker for cancer prognosis and therapeutic targeting, with its inhibition showing promise for enhancing cancer treatment efficacy.

Sources cited
1
USP31 is a deubiquitylating enzyme with conserved ubiquitin hydrolase domain; primarily expressed in testis and lung tissue
PMID: 15354349
2
USP31 in macrophages promotes atherosclerosis through NF-κB pathway activation regulated by HuR-mediated mRNA stability
PMID: 39028686
3
USP31 specifically deubiquitinates GPX4 protein; USP31 inhibition induces GPX4 ubiquitination and degradation in hepatocellular carcinoma
PMID: 37011699
4
USP31 knockdown promotes ferroptosis and enhances radiosensitivity in cervical cancer cells through GPX4 regulation
PMID: 40382845
5
USP31 activates Wnt/β-catenin signaling by deubiquitinating β-catenin, promoting gastric cancer proliferation and metastasis
PMID: 38715330
6
USP31 stabilizes E2F1 transcription factor expression and promotes lung squamous cell carcinoma progression through autophagy
PMID: 38204265
7
USP31 expression correlates with poor prognosis in clear cell renal cell carcinoma and associates with immune checkpoint expression
PMID: 37699648
8
USP31 low expression associates with worse prognosis in endometrial cancer; may participate in MAPK and NF-κB signaling pathways
PMID: 36508192
Disease Associationsⓘ20
temporomandibular joint disorderOpen Targets
0.30Weak
circadian rhythm sleep disorderOpen Targets
0.26Weak
Sensorineural hearing impairmentOpen Targets
0.12Weak
sensorineural hearing lossOpen Targets
0.12Weak
Barrett's esophagusOpen Targets
0.09Suggestive
Young adult-onset ParkinsonismOpen Targets
0.07Suggestive
atypical juvenile parkinsonismOpen Targets
0.06Suggestive
spinocerebellar ataxia type 12Open Targets
0.05Suggestive
Spinocerebellar ataxia type 40Open Targets
0.05Suggestive
Hereditary late-onset Parkinson diseaseOpen Targets
0.05Suggestive
Basal ganglia calcificationOpen Targets
0.05Suggestive
bilateral striopallidodentate calcinosisOpen Targets
0.05Suggestive
Rapid-onset dystonia-parkinsonismOpen Targets
0.05Suggestive
Adult-onset dystonia-parkinsonismOpen Targets
0.05Suggestive
neuroferritinopathyOpen Targets
0.05Suggestive
X-linked spinocerebellar ataxia type 4Open Targets
0.05Suggestive
spinocerebellar ataxia type 15/16Open Targets
0.05Suggestive
hypermanganesemia with dystonia 2Open Targets
0.05Suggestive
leukoencephalopathy with calcifications and cystsOpen Targets
0.05Suggestive
dystonia 22, adult-onsetOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
USP11Shared pathway100%JOSD1Shared pathway100%OTULINLShared pathway100%USP17L23Shared pathway100%USP54Shared pathway100%JOSD2Shared pathway100%
Tissue Expression6 tissues
Heart
100%
Brain
71%
Liver
51%
Lung
47%
Bone Marrow
45%
Ovary
22%
Gene Interaction Network
Click a node to explore
USP31USP11JOSD1OTULINLUSP17L23USP54JOSD2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q70CQ4
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.49Moderately Constrained
pLIⓘ
0.97Intolerant
Observed/Expected LoF0.38 [0.29–0.49]
RankingsWhere USP31 stands among ~20K protein-coding genes
  • #13,116of 20,598
    Most Researched25
  • #2,861of 17,882
    Most Constrained (LOEUF)0.49 · top quartile
Genes detectedUSP31
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
CircARCN1 aggravates atherosclerosis by regulating HuR-mediated USP31 mRNA in macrophages.
PMID: 39028686
Cardiovasc Res · 2024
1.00
2
Plumbagin is a novel GPX4 protein degrader that induces apoptosis in hepatocellular carcinoma cells.
PMID: 37011699
Free Radic Biol Med · 2023
0.90
3
Identification of the human ubiquitin specific protease 31 (USP31) gene: structure, sequence and expression analysis.
PMID: 15354349
DNA Seq · 2004
0.80
4
USP31 confers radio-resistance in cervical cancer cells via ferroptosis pathway by deubiquitinating and stabilizing GPX4.
PMID: 40382845
Biochem Biophys Res Commun · 2025
0.70
5
Systemic analysis of the expression and prognostic significance of USP31 in endometrial cancer.
PMID: 36508192
Biomol Biomed · 2023
0.60