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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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WDR76
WD repeat domain 76
Chromosome 15 · 15q15.3
NCBI Gene: 79968Ensembl: ENSG00000092470.12HGNC: HGNC:25773UniProt: A0A0C4DFX7
42PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
heterochromatinsite of DNA damageenzyme bindingDNA damage responseneutropeniaDecreased total leukocyte countovarian dysfunctioncancer
✦AI Summary

WDR76 (WD repeat domain 76) is a WD40-containing protein with multifaceted roles in chr15 biology and DNA damage response. As a reader protein, WDR76 specifically binds 5-hydroxymethylcytosine (5hmC), suggesting epigenetic regulatory functions 1. Mechanistically, WDR76 co-localizes with heterochromatin-associated proteins (CBX1, CBX3, CBX5) and histone H2A, H2B, and H4, demonstrating chr15 association 2. Upon DNA damage induction, WDR76 is rapidly recruited to damage sites, comparable to established DNA damage response proteins like PARP1 and XRCC5 2. In ferroptosis regulation, WDR76 antagonizes CRL4DCAF8-mediated degradation of the chr15 remodeler LSH through competitive inhibition, with DNA hydroxymethylation fostering this interaction 1. Disease relevance is substantial: WDR76 acts as a tumor suppressor in colorectal cancer by mediating RAS polyubiquitination-dependent degradation and suppressing cancer stem cell activation; lower WDR76 levels associate with poor patient survival 3. In hepatocellular carcinoma, elevated WDR76 expression paradoxically predicts poor prognosis as a ferroptosis-related biomarker 4. Additionally, WDR76 mRNA stability is regulated through m6A-dependent mechanisms 5, and WDR76:SPIN1 complexes bind H3K4me3 marks on nucleosomes 6, linking it to transcriptional regulation and DNA damage checkpoint control.

Sources cited
1
WDR76 binds 5-hydroxymethylcytosine (5hmC) and antagonizes DCAF8-targeted LSH proteolysis through competitive inhibition in ferroptosis regulation
PMID: 33288900
2
WDR76 co-localizes with heterochromatin proteins and histones, and is rapidly recruited to laser-induced DNA damage sites
PMID: 27248496
3
WDR76 mediates RAS polyubiquitination-dependent degradation and suppresses cancer stem cell activation in colorectal cancer; lower WDR76 associates with poor survival
PMID: 31362761
4
Elevated WDR76 mRNA expression is associated with poor prognosis in hepatocellular carcinoma as a ferroptosis-related biomarker
PMID: 37866659
5
WDR76:SPIN1 complex recognizes H3K4me3 epigenetic marks and binds nucleosomes with roles in DNA damage response
PMID: 39116123
6
WDR76 mRNA stability is regulated in an m6A-dependent manner through LRPPRC recognition
PMID: 38372449
Disease Associationsⓘ20
neutropeniaOpen Targets
0.28Weak
Decreased total leukocyte countOpen Targets
0.27Weak
ovarian dysfunctionOpen Targets
0.13Weak
cancerOpen Targets
0.11Weak
neoplasmOpen Targets
0.10Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.06Suggestive
obesityOpen Targets
0.05Suggestive
lung adenocarcinomaOpen Targets
0.04Suggestive
Hepatic steatosisOpen Targets
0.04Suggestive
diverticular diseaseOpen Targets
0.03Suggestive
triple-negative breast cancerOpen Targets
0.03Suggestive
mathematical abilityOpen Targets
0.03Suggestive
schizophreniaOpen Targets
0.03Suggestive
gliomaOpen Targets
0.02Suggestive
Insulin resistanceOpen Targets
0.02Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
uterine leiomyosarcomaOpen Targets
0.01Suggestive
metabolic diseaseOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HELLSProtein interaction97%DDB1Protein interaction87%PARP1Protein interaction78%THYN1Protein interaction77%CUL4AProtein interaction76%CBX3Protein interaction76%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
59%
Lung
17%
Ovary
13%
Heart
8%
Liver
5%
Gene Interaction Network
Click a node to explore
WDR76HELLSDDB1PARP1THYN1CUL4ACBX3
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9H967
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.94LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.74 [0.58–0.94]
RankingsWhere WDR76 stands among ~20K protein-coding genes
  • #9,961of 20,598
    Most Researched42
  • #8,768of 17,882
    Most Constrained (LOEUF)0.94
Genes detectedWDR76
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
LRPPRC promotes glycolysis by stabilising LDHA mRNA and its knockdown plus glutamine inhibitor induces synthetic lethality via m
PMID: 38372449
Clin Transl Med · 2024
1.00
2
An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.
PMID: 39116123
Proc Natl Acad Sci U S A · 2024
0.90
3
The role of WDR76 protein in human diseases.
PMID: 33714259
Bosn J Basic Med Sci · 2021
0.80
4
Identification of a novel circRNA-miRNA-mRNA regulatory axis in hepatocellular carcinoma based on bioinformatics analysis.
PMID: 36878930
Sci Rep · 2023
0.70
5
WDR76 degrades RAS and suppresses cancer stem cell activation in colorectal cancer.
PMID: 31362761
Cell Commun Signal · 2019
0.60