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GeneE
3 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ZC2HC1A
zinc finger C2HC-type containing 1A
Chromosome 8 Β· 8q21.13
NCBI Gene: 51101Ensembl: ENSG00000104427.13HGNC: HGNC:24277UniProt: B2R9B8
38PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingmultiple sclerosisalcohol drinkingmale reproductive organ cancerB-cell acute lymphoblastic leukemia
✦AI Summary

ZC2HC1A is a zinc finger C2HC-type protein with protein binding capacity that has emerged as a potential prognostic biomarker across multiple cancer types. In hepatocellular carcinoma (HCC), ZC2HC1A was identified as one of nine genes in a prognostic signature associated with patient survival, where upregulation correlated with poor prognosis 1. The signature demonstrated strong predictive performance (concordance index 0.78-0.86) and successfully stratified HBV/HCV-infected patients into risk groups 1. Similarly, ZC2HC1A was selected as part of a 12-gene m6A-related signature panel for ovarian cancer prognosis, serving as an independent prognostic indicator (P=2.29E-18, HR=1.699) 2. Beyond cancer, ZC2HC1A was identified as a long non-coding RNA (ZC2HC1A-2) involved in regulating cytokine expression during Zika virus-infected macrophage responses, suggesting a role in inflammatory gene regulation 3. While these studies establish ZC2HC1A's clinical relevance as a prognostic marker and its involvement in inflammatory regulation, the precise molecular mechanisms underlying its protein function remain incompletely characterized. Further mechanistic studies are needed to understand how ZC2HC1A regulates gene expression and contributes to cancer progression and viral immunity.

Sources cited
1
ZC2HC1A was identified as an upregulated gene in a 9-gene prognostic signature for HCC, associated with poor prognosis and validated across multiple patient cohorts
PMID: 31215439
2
ZC2HC1A was selected as part of a 12-gene m6A-related signature panel for ovarian cancer prognosis as an independent prognostic indicator
PMID: 34137363
3
ZC2HC1A-2 (a long non-coding RNA) was identified as involved in regulating cytokine expression during ZIKV-infected macrophage inflammatory responses
PMID: 36257579
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
multiple sclerosisOpen Targets
0.41Moderate
alcohol drinkingOpen Targets
0.31Weak
male reproductive organ cancerOpen Targets
0.30Weak
B-cell acute lymphoblastic leukemiaOpen Targets
0.29Weak
adolescent idiopathic scoliosisOpen Targets
0.29Weak
cancerOpen Targets
0.29Weak
bone fractureOpen Targets
0.28Weak
psoriasisOpen Targets
0.21Weak
pulmonary arterial hypertensionOpen Targets
0.04Suggestive
knee fractureOpen Targets
0.03Suggestive
jaw diseaseOpen Targets
0.03Suggestive
nervous system diseaseOpen Targets
0.03Suggestive
ovarian neoplasmOpen Targets
0.03Suggestive
diabetes mellitusOpen Targets
0.03Suggestive
basal cell carcinomaOpen Targets
0.03Suggestive
synovium disorderOpen Targets
0.03Suggestive
biliary tract diseaseOpen Targets
0.03Suggestive
tricuspid valve diseaseOpen Targets
0.03Suggestive
HypercholesterolemiaOpen Targets
0.02Suggestive
Genu valgumOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
CASTOR1Protein interaction87%
Tissue Expression6 tissues
Brain
100%
Ovary
100%
Heart
66%
Lung
36%
Bone Marrow
18%
Liver
9%
Gene Interaction Network
Click a node to explore
ZC2HC1ACASTOR1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q96GY0
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.09LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.74 [0.51–1.09]
RankingsWhere ZC2HC1A stands among ~20K protein-coding genes
  • #10,575of 20,598
    Most Researched38
  • #11,168of 17,882
    Most Constrained (LOEUF)1.09
Genes detectedZC2HC1A
Sources retrieved3 papers
Response timeβ€”
πŸ“„ Sources
3
1
Transcriptional and post-transcriptional mechanisms that regulate the genetic program in Zika virus-infected macrophages.
PMID: 36257579
Int J Biochem Cell Biol Β· 2022
1.00
2
Development and validation of a new tumor-based gene signature predicting prognosis of HBV/HCV-included resected hepatocellular carcinoma patients.
PMID: 31215439
J Transl Med Β· 2019
0.67
3
N6-Methyladenosine-Related RNA Signature Predicting the Prognosis of Ovarian Cancer.
PMID: 34137363
Recent Pat Anticancer Drug Discov Β· 2021
0.33