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7 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ZMYND19
zinc finger MYND-type containing 19
Chromosome 9 · 9q34.3
NCBI Gene: 116225Ensembl: ENSG00000165724.7HGNC: HGNC:21146UniProt: Q96E35
20PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcytoplasmmembranesynapsesialolithiasisGenu varumGenu valgumatopic eczema
✦AI Summary

ZMYND19 is a zinc finger MYND-type protein that functions as a negative regulator of mTORC1 signaling at the lysosomal membrane. As a substrate of the CTLH E3 ubiquitin ligase complex, ZMYND19 is degraded via the ubiquitin/proteasome pathway, with its stability conditionally regulated by TNF-α stimulation and mTOR inhibition 1. When accumulated (upon CTLH inhibition), ZMYND19 associates with lysosomes and MKLN1 to inhibit mTORC1 activation by blocking the interaction between mTORC1 and its activator Rheb, as well as mTORC1 substrates S6 and 4E-BP1 23. ZMYND19 is recruited by the GID4 adaptor subunit of the hGID E3 ligase complex, which regulates its ubiquitination 4. Structurally, ZMYND19's MYND zinc-finger domain mediates binding to tubulin 5, and the protein localizes to cytoplasmic, membrane, and synaptosomal compartments, with somatodendritic localization in neurons 6. In hepatocellular carcinoma, ZMYND19 expression is upregulated through a lncRNA FABP5P3/miR-589-5p regulatory axis, promoting cell proliferation, migration, and invasion 7, suggesting pathological roles in cancer development.

Sources cited
1
ZMYND19 is a CTLH substrate that associates with lysosomes to inhibit mTORC1 by blocking mTORC1-Rheb and mTORC1-substrate interactions
PMID: 41315365
2
ZMYND19 is recruited as a substrate by the GID4 adaptor of the hGID E3 ligase complex
PMID: 34647674
3
ZMYND19 is upregulated in hepatocellular carcinoma via FABP5P3/miR-589-5p axis and promotes HCC cell proliferation, migration, and invasion
PMID: 29522715
4
ZMYND19 and MKLN1 accumulate upon CTLH inactivation and inhibit mTORC1 at lysosomes by blocking late-stage activation
PMID: 38746323
5
ZMYND19 contains a C-degron recognized by CTLH/Muskelin with stability conditionally regulated by TNF-α and mTOR inhibition
PMID: 41648430
6
ZMYND19 (MIZIP) is detected in cytoplasmic, membrane, and synaptosomal fractions with somatodendritic neuronal localization
PMID: 15950311
7
ZMYND19's MYND zinc-finger domain binds to alpha- and beta-tubulin monomers but not microtubules
PMID: 16039987
Disease Associationsⓘ20
sialolithiasisOpen Targets
0.28Weak
Genu varumOpen Targets
0.27Weak
Genu valgumOpen Targets
0.27Weak
atopic eczemaOpen Targets
0.05Suggestive
cholelithiasisOpen Targets
0.03Suggestive
childhood onset asthmaOpen Targets
0.03Suggestive
malunion fractureOpen Targets
0.03Suggestive
Eczematoid dermatitisOpen Targets
0.03Suggestive
allergic asthmaOpen Targets
0.03Suggestive
asthmaOpen Targets
0.03Suggestive
allergic rhinitisOpen Targets
0.02Suggestive
dermatitisOpen Targets
0.02Suggestive
lower respiratory tract diseaseOpen Targets
0.02Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.00Suggestive
ulcerative colitisOpen Targets
0.00Suggestive
colorectal carcinomaOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TUBBProtein interaction99%ARMC8Protein interaction91%RMND5AProtein interaction91%DEAF1Protein interaction81%MCHR1Protein interaction78%FAM170AProtein interaction76%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
84%
Ovary
66%
Lung
64%
Brain
61%
Heart
42%
Gene Interaction Network
Click a node to explore
ZMYND19TUBBARMC8RMND5ADEAF1MCHR1FAM170A
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q96E35
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.83LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.55 [0.38–0.83]
RankingsWhere ZMYND19 stands among ~20K protein-coding genes
  • #14,328of 20,598
    Most Researched20
  • #7,032of 17,882
    Most Constrained (LOEUF)0.83
Genes detectedZMYND19
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
The CTLH ubiquitin ligase substrates ZMYND19 and MKLN1 negatively regulate mTORC1 at the lysosomal membrane.
PMID: 41315365
Nat Commun · 2025
1.00
2
The human GID complex engages two independent modules for substrate recruitment.
PMID: 34647674
EMBO Rep · 2021
0.86
3
LncRNA FABP5P3/miR-589-5p/ZMYND19 axis contributes to hepatocellular carcinoma cell proliferation, migration and invasion.
PMID: 29522715
Biochem Biophys Res Commun · 2018
0.71
4
The CTLH Ubiquitin Ligase Substrates ZMYND19 and MKLN1 Negatively Regulate mTORC1 at the Lysosomal Membrane.
PMID: 38746323
Res Sq · 2024
0.57
5
Proteome-wide C-degron activity profiling connects conditional regulation of the CTLH E3 ligase complex to ribosome biogenesis.
PMID: 41648430
bioRxiv · 2026
0.43