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9 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ZNF420
zinc finger protein 420
Chromosome 19 · 19q13.12
NCBI Gene: 147923Ensembl: ENSG00000197050.12HGNC: HGNC:20649UniProt: Q8TAQ5
22PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingDNA-binding transcription factor activity, RNA polymerase II-specificRNA polymerase II cis-regulatory region sequence-specific DNA bindingregulation of transcription by RNA polymerase IIcardiac transplantedemabrain compressionbreast ductal adenocarcinoma
✦AI Summary

ZNF420 is a zinc finger protein with transcriptional regulatory function that binds DNA and regulates RNA polymerase II-dependent gene expression 1. The protein contains zinc finger domains enabling sequence-specific DNA binding and acts as a transcription factor in the nucleus and nucleoplasm. ZNF420 has emerged as a significant biomarker in cardiovascular and oncological contexts. During off-pump coronary artery bypass grafting, ZNF420 was identified as a cardioprotection-related biomarker, with pathway enrichment analysis revealing involvement in cell cycle and tricarboxylic acid cycle regulation 1. In head and neck squamous cell carcinoma, ZNF420 was selected among top zinc finger genes showing differential DNA methylation in tumors compared to normal tissues, demonstrating 100% specificity for cancer detection in primary tissue and saliva samples when combined with other methylation biomarkers 2. While direct functional studies of ZNF420 are limited in provided abstracts, its classification within the KRAB-type zinc finger protein family suggests potential roles in gene repression and stress response regulation, similar to related zinc finger proteins like Apak that regulate p53-mediated apoptosis and ribosomal biogenesis 34. ZNF420's utility as a clinical biomarker indicates its differential expression patterns may reflect important pathophysiological processes in cardiovascular and cancer contexts.

Sources cited
1
ZNF420 identified as cardioprotection-related zinc finger biomarker during OPCABG; involved in cell cycle and tricarboxylic acid cycle pathways
PMID: 38178349
2
ZNF420 shows differential DNA methylation in head and neck squamous cell carcinoma with 100% specificity for cancer detection in tissue and saliva
PMID: 26544568
3
KRAB-type zinc-finger proteins like Apak regulate p53-mediated apoptosis through transcriptional repression
PMID: 19377469
4
KRAB-type zinc-finger protein Apak regulates ribosomal stress response and pre-rRNA synthesis in nucleolus
PMID: 25691462
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
cardiac transplantOpen Targets
0.31Weak
brain compressionOpen Targets
0.22Weak
edemaOpen Targets
0.22Weak
breast ductal adenocarcinomaOpen Targets
0.11Weak
metabolic syndromeOpen Targets
0.07Suggestive
Okt4 epitope deficiencyOpen Targets
0.06Suggestive
transient myeloproliferative syndromeOpen Targets
0.05Suggestive
Crohn's diseaseOpen Targets
0.05Suggestive
neutrophil immunodeficiency syndromeOpen Targets
0.04Suggestive
Alzheimer diseaseOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.02Suggestive
head and neck squamous cell carcinomaOpen Targets
0.01Suggestive
psoriasisOpen Targets
0.01Suggestive
readingOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
septic shockOpen Targets
0.00Suggestive
fetal growth restrictionOpen Targets
0.00Suggestive
sarcopeniaOpen Targets
0.00Suggestive
gastric carcinomaOpen Targets
0.00Suggestive
oral squamous cell carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ATMProtein interaction100%TP53AIP1Protein interaction80%
Tissue Expression6 tissues
Brain
100%
Heart
87%
Ovary
79%
Liver
53%
Lung
37%
Bone Marrow
37%
Gene Interaction Network
Click a node to explore
ZNF420ATMTP53AIP1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8TAQ5
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.89LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.67 [0.51–0.89]
RankingsWhere ZNF420 stands among ~20K protein-coding genes
  • #13,806of 20,598
    Most Researched22
  • #8,023of 17,882
    Most Constrained (LOEUF)0.89
Genes detectedZNF420
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
Identification of Anesthetic-Induced Cardiovascular Biomarkers in Off-Pump Coronary Artery Bypass Grafting Surgery Using Weighted Gene Co-Expression Network Analysis and Machine Learning.
PMID: 38178349
Heart Surg Forum · 2023
1.00
2
Outlier Analysis Defines Zinc Finger Gene Family DNA Methylation in Tumors and Saliva of Head and Neck Cancer Patients.
PMID: 26544568
PLoS One · 2015
0.89
3
H3K9me3 facilitates hypoxia-induced p53-dependent apoptosis through repression of APAK.
PMID: 25961932
Oncogene · 2016
0.78
4
Get your fingers out of p53's way!
PMID: 22422000
EMBO Rep · 2012
0.67
5
KRAB-type zinc-finger protein Apak specifically regulates p53-dependent apoptosis.
PMID: 19377469
Nat Cell Biol · 2009
0.56