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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ZNF683
zinc finger protein 683
Chromosome 1 · 1p36.11
NCBI Gene: 257101Ensembl: ENSG00000176083.19HGNC: HGNC:28495UniProt: Q8IZ20
13PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingDNA-binding transcription factor activitypromoter-specific chromatin bindingRNA polymerase II cis-regulatory region sequence-specific DNA bindingconcussionnonpapillary renal cell carcinomaMiyoshi myopathycancer
✦AI Summary

ZNF683 (zinc finger protein 683) is a transcriptional repressor that functions as a master regulator of tissue-resident lymphocyte identity and anti-tumor immunity. It binds DNA within promoter regions to regulate gene expression programs in CD8+ T cells and natural killer (NK) cells 1. ZNF683 marks a distinct population of intermediate exhausted CD8+ effector/memory T cells that retain cytotoxic potential and express key genes including TCF7, LMO2, and CD69 2. In tissue-resident settings, ZNF683 is required for NK cell tissue imprinting and ILC1 development independent of the NK-specifying factor EOMES 3. Clinically, ZNF683+ CD8+ T cells associate strongly with immunotherapy response across multiple cancer types. Patients with Richter syndrome and head and neck cancer experiencing response to anti-PD-1 therapy show enriched preexisting ZNF683+CTX+ tumor-infiltrating lymphocytes 21. Similarly, ZNF683+ CD8+ cells predict favorable outcomes in acute myeloid leukemia treated with donor lymphocyte infusion, where these cells coordinate antitumor immunity within bone marrow microenvironments 4. However, elevated ZNF683 expression in certain contexts (such as KRAS/STK11 co-mutant lung cancers) may indicate tumor residence phenotypes potentially detrimental to systemic anti-tumor responses 5. ZNF683 represents a biomarker for identifying T cells with therapeutic potential and a mechanistic target for optimizing immunotherapy strategies.

Sources cited
1
ZNF683 is required for tissue residency in ILC1s and marks tissue-imprinted NK cells expressing EOMES transcripts
PMID: 38956380
2
ZNF683 marks intermediate exhausted CD8+ effector/memory T cells with high cytotoxic potential; directly targets TCF7, LMO2, CD69; associates with anti-PD-1 response in Richter syndrome
PMID: 37738974
3
ZNF683+CTX+ CD8+ tumor-infiltrating lymphocytes with tissue-resident memory program predict response to neoadjuvant anti-PD-1 in head and neck cancer
PMID: 37683037
4
ZNF683+ CD8+ cytotoxic T lymphocytes in acute myeloid leukemia originate from donor lymphocyte infusion and coordinate antitumor immune responses in responders
PMID: 39854478
5
ZNF683 expression marks tumor-resident T cells in KRAS/STK11 co-mutant lung cancers; elevated tissue residence phenotype associates with worse outcomes after neoadjuvant ICB
PMID: 39545922
6
CD8 ZNF683+ cells are identified in recurrent nasopharyngeal carcinoma with lower cytotoxicity as part of immune escape mechanisms
PMID: 40691404
7
ZNF683+ NK cells mark tissue-resident NK cell subset with exhaustion signature identified in nasopharyngeal carcinoma
PMID: 37098551
8
ZNF683 upregulation in CD8+ effector T cells correlates with enhanced anti-tumor activity of optimized GPC2-targeting CAR T cells in neuroblastoma models
PMID: 36631162
Disease Associationsⓘ20
concussionOpen Targets
0.15Weak
nonpapillary renal cell carcinomaOpen Targets
0.07Suggestive
Miyoshi myopathyOpen Targets
0.07Suggestive
cancerOpen Targets
0.07Suggestive
isolated agammaglobulinemiaOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.06Suggestive
combined immunodeficiency with skin granulomasOpen Targets
0.05Suggestive
agammaglobulinemia 7, autosomal recessiveOpen Targets
0.05Suggestive
common variable immunodeficiencyOpen Targets
0.05Suggestive
immunodeficiency 18Open Targets
0.05Suggestive
immunodeficiency 15aOpen Targets
0.04Suggestive
immunodeficiency, common variable, 4Open Targets
0.04Suggestive
immunodeficiency 112Open Targets
0.04Suggestive
immunodeficiency 19Open Targets
0.04Suggestive
Okt4 epitope deficiencyOpen Targets
0.04Suggestive
X-Linked Combined Immunodeficiency DiseasesOpen Targets
0.04Suggestive
activated PI3K-delta syndromeOpen Targets
0.04Suggestive
idiopathic CD4 lymphocytopeniaOpen Targets
0.04Suggestive
Cernunnos-XLF deficiencyOpen Targets
0.04Suggestive
cytomegalovirus infectionOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CD8AProtein interaction90%GZMHProtein interaction87%LOC728743Shared pathway25%ATXN7L3BShared pathway25%CAVIN4Shared pathway25%UNCXShared pathway25%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
15%
Liver
6%
Ovary
3%
Brain
0%
Heart
0%
Gene Interaction Network
Click a node to explore
ZNF683CD8AGZMHLOC728743ATXN7L3BCAVIN4UNCX
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8IZ20
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.93LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.64 [0.45–0.93]
RankingsWhere ZNF683 stands among ~20K protein-coding genes
  • #16,371of 20,598
    Most Researched13
  • #8,581of 17,882
    Most Constrained (LOEUF)0.93
Genes detectedZNF683
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Diversity of group 1 innate lymphoid cells in human tissues.
PMID: 38956380
Nat Immunol · 2024
1.00
2
Single-cell and spatial transcriptomics reveal mechanisms of radioresistance and immune escape in recurrent nasopharyngeal carcinoma.
PMID: 40691404
Nat Genet · 2025
0.90
3
ZNF683 marks a CD8
PMID: 37738974
Cancer Cell · 2023
0.80
4
Coordinated immune networks in leukemia bone marrow microenvironments distinguish response to cellular therapy.
PMID: 39854478
Sci Immunol · 2025
0.70
5
Preexisting tumor-resident T cells with cytotoxic potential associate with response to neoadjuvant anti-PD-1 in head and neck cancer.
PMID: 37683037
Sci Immunol · 2023
0.60