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25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ABCD3
ATP binding cassette subfamily D member 3
Chromosome 1 · 1p21.3
NCBI Gene: 5825Ensembl: ENSG00000117528.15HGNC: HGNC:67UniProt: P28288
202PubMed Papers
21Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Transporter
RESEARCH IMPACT
Trending
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
long-chain fatty acid transmembrane transporter activityprotein bindingATP bindingATP hydrolysis activitycongenital bile acid synthesis defect 5oculopharyngodistal myopathyAbnormality of the skeletal systemfood allergy
✦AI Summary

ABCD3 (ATP binding cassette subfamily D member 3) is a peroxisomal ATP-dependent transporter that catalyzes the transport of long-chain fatty acids-CoA, dicarboxylic acids-CoA, and bile acids from the cytosol to the peroxisome lumen for beta-oxidation 1. The protein exhibits fatty acyl-CoA thioesterase and ATPase activities, likely hydrolyzing fatty acyl-CoAs into free fatty acids prior to their ATP-dependent transport into peroxisomes 1. ABCD3 plays a crucial role in regulating long-chain fatty acid metabolism and energy homeostasis through beta-oxidation processes 1. Recent genetic discoveries have identified CCG repeat expansions in ABCD3 (ranging from 118 to 694 repeats) as a cause of oculopharyngodistal myopathy (OPDM) in individuals of European ancestry 2. This represents a novel mechanism where ABCD3 transcript appears upregulated in affected tissues, suggesting that over-expression of CCG repeat-containing ABCD3 transcript contributes to progressive skeletal muscle degeneration 2. The identification of ABCD3 repeat expansions provides diagnostic opportunities for previously unsolved neuromuscular diseases and strengthens the association between CGG•CCG repeat motifs and specific patterns of muscle weakness 23.

Sources cited
1
ABCD3 functions as an ATP-dependent transporter for fatty acids and exhibits thioesterase/ATPase activities
PMID: 38909044
2
CCG repeat expansions in ABCD3 cause oculopharyngodistal myopathy in European ancestry individuals
PMID: 39068203
3
ABCD3 repeat expansions are a novel cause of oculopharyngodistal myopathy
PMID: 39017652
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ21
congenital bile acid synthesis defect 5Open Targets
0.45Moderate
oculopharyngodistal myopathyOpen Targets
0.38Weak
Abnormality of the skeletal systemOpen Targets
0.36Weak
food allergyOpen Targets
0.15Weak
colorectal carcinomaOpen Targets
0.10Suggestive
drug allergyOpen Targets
0.09Suggestive
gliomaOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.08Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.07Suggestive
glioblastoma multiformeOpen Targets
0.06Suggestive
prostate cancerOpen Targets
0.05Suggestive
prostate neoplasmOpen Targets
0.05Suggestive
transient ischemic attackOpen Targets
0.05Suggestive
X-linked adrenoleukodystrophyOpen Targets
0.05Suggestive
gallbladder diseaseOpen Targets
0.04Suggestive
gallbladder disease 1Open Targets
0.04Suggestive
adrenoleukodystrophyOpen Targets
0.04Suggestive
diabetes mellitus, permanent neonatal 4Open Targets
0.04Suggestive
sclerosing cholangitisOpen Targets
0.04Suggestive
strokeOpen Targets
0.03Suggestive
Congenital bile acid synthesis defect 5UniProt
Pathogenic Variants1
NM_002858.4(ABCD3):c.1903-573_*1108delPathogenic
Congenital bile acid synthesis defect 5
☆☆☆☆2015
View on ClinVar ↗
Related Genes
ACSL3Protein interaction98%ACSL4Protein interaction98%PEX12Protein interaction98%PEX13Protein interaction98%PEX14Protein interaction98%PEX19Protein interaction98%
Tissue Expression6 tissues
Liver
100%
Heart
53%
Brain
37%
Bone Marrow
26%
Lung
23%
Ovary
18%
Gene Interaction Network
Click a node to explore
ABCD3ACSL3ACSL4PEX12PEX13PEX14PEX19
PROTEIN STRUCTURE
Preparing viewer…
PDB8Z9X · 2.96 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.48Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.35 [0.26–0.48]
RankingsWhere ABCD3 stands among ~20K protein-coding genes
  • #2,077of 20,598
    Most Researched202 · top quartile
  • #4,725of 5,498
    Most Pathogenic Variants1
  • #2,842of 17,882
    Most Constrained (LOEUF)0.48 · top quartile
Genes detectedABCD3
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
Long-read sequencing improves diagnostic rate in neuromuscular disorders.
PMID: 38406378
Acta Myol · 2023
1.00
2
Organelle-specific autophagy in inflammatory diseases: a potential therapeutic target underlying the quality control of multiple organelles.
PMID: 32048886
Autophagy · 2021
0.90
3
HNF4A and HNF1A exhibit tissue specific target gene regulation in pancreatic beta cells and hepatocytes.
PMID: 38909044
Nat Commun · 2024
0.80
4
PEX13 prevents pexophagy by regulating ubiquitinated PEX5 and peroxisomal ROS.
PMID: 36541703
Autophagy · 2023
0.70
5
Molecular mechanism of substrate transport by human peroxisomal ABCD3.
PMID: 40501884
bioRxiv · 2025
0.68