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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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ANKH
ANKH inorganic pyrophosphate transport regulator
Chromosome 5 Β· 5p15.2
NCBI Gene: 56172Ensembl: ENSG00000154122.15HGNC: HGNC:15492UniProt: Q9HCJ1
81PubMed Papers
22Diseases
0Drugs
13Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
phosphate transmembrane transporter activityATP transmembrane transporter activitytransmembrane transporter activitymembranechondrocalcinosis 2craniometaphyseal dysplasiadiabetes mellitustype 2 diabetes mellitus
✦AI Summary

ANKH is a transmembrane transporter protein that exports ATP and other nucleoside triphosphates from the cytosol to the extracellular space, playing a central role in regulating local inorganic pyrophosphate (PPi) levels in peripheral tissues 1. The protein prevents pathologic joint mineralization by maintaining adequate extracellular PPi concentrations, which inhibit calcium pyrophosphate crystal formation 2. ANKH expression is regulated by intracellular oxygen, phosphate, calcium levels, and TGF-Ξ² signaling, and the protein interacts with multiple cellular components including phosphate transporters and NF-ΞΊB signaling proteins 3. Additionally, ANKH regulates extracellular levels of citrate and other TCA cycle intermediates essential for bone osteogenic differentiation and strength. Mutations in ANKH cause familial calcium pyrophosphate deposition disease (CPPD) by enhancing protein activity and elevating extracellular PPi, promoting pathologic crystal deposition and inflammatory arthritis 1. ANKH variants are also associated with craniometaphyseal dysplasia and represent genetic risk factors for sporadic CPPD 4. Notably, protective ANKH alleles are enriched in cognitively healthy centenarians, suggesting a role in neuroprotection against Alzheimer's disease through immune and endolysosomal pathways 5. Beyond mineralization disorders, ANKH influences chondrogenesis, osteoblastogenesis, and osteoclastogenesis, indicating broader significance in skeletal biology.

Sources cited
1
ANKH protein transports pyrophosphate from intracellular to extracellular compartment; mutations enhance activity and elevate extracellular pyrophosphate levels
PMID: 15474385
2
ANKH regulates extracellular pyrophosphate levels; mutations in ANKH cause familial CPPD
PMID: 21102543
3
ANKH expression regulated by oxygen, phosphate, calcium, and TGF-Ξ²; affects chondrogenesis, osteoblastogenesis, osteoclastogenesis; regulates ATP efflux from chondrocytes
PMID: 26599446
4
ANKH genetic variants are uncommon causes of CPPD disease; CPPD causes inflammation and is associated with osteoarthritis
PMID: 39089298
5
Protective ANKH alleles enriched in cognitively healthy centenarians; protective effect involves endolysosomal and immune systems
PMID: 38634500
6
ANKH is transmembrane protein that regulates inorganic pyrophosphate transport; mutations segregate with familial CPPD phenotype
PMID: 12707589
Disease Associationsβ“˜22
chondrocalcinosis 2Open Targets
0.78Strong
craniometaphyseal dysplasiaOpen Targets
0.77Strong
diabetes mellitusOpen Targets
0.56Moderate
type 2 diabetes mellitusOpen Targets
0.55Moderate
glaucomaOpen Targets
0.48Moderate
open-angle glaucomaOpen Targets
0.48Moderate
diabetic retinopathyOpen Targets
0.45Moderate
chondrocalcinosisOpen Targets
0.42Moderate
diabetic neuropathyOpen Targets
0.42Moderate
asthmaOpen Targets
0.33Weak
dislocationOpen Targets
0.33Weak
diabetic eye diseaseOpen Targets
0.32Weak
corneal degenerationOpen Targets
0.29Weak
blood vessel replacementOpen Targets
0.28Weak
pancreatic carcinomaOpen Targets
0.27Weak
benign familial infantile epilepsyOpen Targets
0.27Weak
bronchial diseaseOpen Targets
0.24Weak
malnutritionOpen Targets
0.21Weak
alcohol drinkingOpen Targets
0.20Weak
placenta praeviaOpen Targets
0.20Weak
Chondrocalcinosis 2UniProt
Craniometaphyseal dysplasia, autosomal dominantUniProt
Pathogenic Variants13
NM_054027.6(ANKH):c.1124_1126del (p.Ser375del)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 375
NM_054027.6(ANKH):c.1142-4A>GPathogenic
Craniometaphyseal dysplasia, autosomal dominant|not provided
β˜…β˜…β˜†β˜†2025
NM_054027.6(ANKH):c.1126TTC[1] (p.Phe377del)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant|not provided|Chondrocalcinosis 2
β˜…β˜…β˜†β˜†2024β†’ Residue 377
NM_054027.6(ANKH):c.1165G>A (p.Gly389Arg)Likely pathogenic
Craniometaphyseal dysplasia, autosomal dominant|Chondrocalcinosis 2|not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 389
NM_054027.6(ANKH):c.1261dup (p.Leu421fs)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant
β˜…β˜†β˜†β˜†2024β†’ Residue 421
NM_054027.6(ANKH):c.14C>T (p.Pro5Leu)Likely pathogenic
Chondrocalcinosis 2|not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 5
NM_054027.6(ANKH):c.314-2A>TLikely pathogenic
Craniometaphyseal dysplasia, autosomal dominant
β˜…β˜†β˜†β˜†2023
NM_054027.6(ANKH):c.13C>A (p.Pro5Thr)Pathogenic
Chondrocalcinosis 2|ANKH-related disorder
β˜†β˜†β˜†β˜†2024β†’ Residue 5
NM_054027.6(ANKH):c.1015T>C (p.Cys339Arg)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant
β˜†β˜†β˜†β˜†2010β†’ Residue 339
NM_054027.6(ANKH):c.1172T>C (p.Leu391Pro)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant
β˜†β˜†β˜†β˜†2010β†’ Residue 391
NM_054027.6(ANKH):c.1001T>G (p.Leu334Arg)Pathogenic
Craniometaphyseal dysplasia, autosomal dominant
β˜†β˜†β˜†β˜†2010β†’ Residue 334
NM_054027.6(ANKH):c.1465GAG[1] (p.Glu490del)Pathogenic
CHONDROCALCINOSIS 2, SPORADIC
β˜†β˜†β˜†β˜†2002β†’ Residue 490
NM_054027.6(ANKH):c.143T>C (p.Met48Thr)Pathogenic
Chondrocalcinosis 2
β˜†β˜†β˜†β˜†2002β†’ Residue 48
View on ClinVar β†—
Related Genes
ENPP1Protein interaction80%ALPLProtein interaction71%AHSGShared pathway20%PAPSS1Shared pathway20%SHOXShared pathway20%PRELPShared pathway20%
Tissue Expression6 tissues
Heart
100%
Brain
56%
Liver
34%
Ovary
28%
Bone Marrow
21%
Lung
17%
Gene Interaction Network
Click a node to explore
ANKHENPP1ALPLAHSGPAPSS1SHOXPRELP
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q9HCJ1
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.46Moderately Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.30 [0.20–0.46]
RankingsWhere ANKH stands among ~20K protein-coding genes
  • #5,843of 20,598
    Most Researched81
  • #2,594of 5,498
    Most Pathogenic Variants13
  • #2,630of 17,882
    Most Constrained (LOEUF)0.46 Β· top quartile
Genes detectedANKH
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Calcium pyrophosphate deposition disease.
PMID: 39089298
Lancet Rheumatol Β· 2024
1.00
2
The ANKH gene and familial calcium pyrophosphate dihydrate deposition disease.
PMID: 15474385
Joint Bone Spine Β· 2004
0.90
3
Cognitively healthy centenarians are genetically protected against Alzheimer's disease.
PMID: 38634500
Alzheimers Dement Β· 2024
0.80
4
The role of ANKH in pathologic mineralization of cartilage.
PMID: 26599446
Curr Opin Rheumatol Β· 2016
0.70
5
Genetics of chondrocalcinosis.
PMID: 15951203
Osteoarthritis Cartilage Β· 2005
0.60