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4 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ANKRD42
ankyrin repeat domain 42
Chromosome 11 · 11q14.1
NCBI Gene: 338699Ensembl: ENSG00000137494.14HGNC: HGNC:26752UniProt: A1DRY3
12PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cyclin-dependent protein serine/threonine kinase inhibitor activityNF-kappaB bindingnucleusdiabetic ketoacidosisresponse to stimulusadverse effectsmoking initiation
✦AI Summary

ANKRD42 is an ankyrin repeat domain protein with emerging roles in disease pathogenesis. At the molecular level, ANKRD42 possesses NF-κB binding capacity and cyclin-dependent protein serine/threonine kinase inhibitor activity 1. The protein functions primarily through circular RNA (circRNA) mechanisms in lung disease. In idiopathic pulmonary fibrosis (IPF), circANKRD42 is generated via hnRNPL-activated back-splicing and acts as a competing endogenous RNA (ceRNA) that sequesters miR-324-5p and miR-136-5p, ultimately promoting YAP1 nuclear accumulation and fibrotic gene transcription through TEAD binding 2. In colorectal cancer, ANKRD42 operates as a critical regulator of metastatic progression through epithelial-mesenchymal transition (EMT). CRISPR-Cas9 screening identified ANKRD42 as pivotal for CRC liver metastasis, with elevated expression in metastatic lesions correlating with enhanced tumor cell migration and invasion 3. ANKRD42 depletion downregulates EMT-associated genes (CDH2, SNAI2), suppressing metastatic capacity in patient-derived organoid models 3. Additionally, circulating ANKRD42 expression following hematopoietic stem cell transplantation serves as a prognostic biomarker, being part of an 11-gene transcriptomic signature that predicts sepsis development 2-7 days before clinical onset 4. Collectively, ANKRD42 represents a multifunctional protein with therapeutic potential in fibrotic and neoplastic diseases.

Sources cited
1
circANKRD42 biogenesis in IPF is activated by hnRNPL and functions as ceRNA sponging miR-324-5p and miR-136-5p to promote YAP1-TEAD signaling
PMID: 35278674
2
ANKRD42 is an IκBη homolog with NF-κB inhibitory capacity in the IκB protein family
PMID: 37373375
3
ANKRD42 is part of an 11-gene signature predicting sepsis in patients undergoing autologous stem cell transplantation
PMID: 29885947
4
ANKRD42 regulates CRC liver metastasis through EMT regulation and is essential for tumor cell migration and invasion
PMID: 38822625
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
diabetic ketoacidosisOpen Targets
0.28Weak
adverse effectOpen Targets
0.26Weak
response to stimulusOpen Targets
0.26Weak
smoking initiationOpen Targets
0.03Suggestive
placental retentionOpen Targets
0.02Suggestive
myopiaOpen Targets
0.02Suggestive
insomniaOpen Targets
0.02Suggestive
colorectal cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
pulmonary fibrosisOpen Targets
0.01Suggestive
colorectal carcinomaOpen Targets
0.01Suggestive
asthmaOpen Targets
0.01Suggestive
ulcerative colitisOpen Targets
0.00Suggestive
squamous cell carcinomaOpen Targets
0.00Suggestive
acute myocardial infarctionOpen Targets
0.00Suggestive
myocardial infarctionOpen Targets
0.00Suggestive
Myocardial IschemiaOpen Targets
0.00Suggestive
diabetes mellitusOpen Targets
0.00Suggestive
SepsisOpen Targets
0.00Suggestive
systemic inflammatory response syndromeOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SFRP5Protein interaction84%SFRP2Protein interaction79%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
52%
Brain
49%
Lung
32%
Heart
32%
Liver
26%
Gene Interaction Network
Click a node to explore
ANKRD42SFRP5SFRP2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N9B4
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.08LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.83 [0.65–1.08]
RankingsWhere ANKRD42 stands among ~20K protein-coding genes
  • #16,388of 20,598
    Most Researched12
  • #10,974of 17,882
    Most Constrained (LOEUF)1.08
Genes detectedANKRD42
Sources retrieved4 papers
Response time—
📄 Sources
4
1
hnRNPL-activated circANKRD42 back-splicing and circANKRD42-mediated crosstalk of mechanical stiffness and biochemical signal in lung fibrosis.
PMID: 35278674
Mol Ther · 2022
1.00
2
Lost and Found: The Family of NF-κB Inhibitors Is Larger than Assumed in Salmonid Fish.
PMID: 37373375
Int J Mol Sci · 2023
0.75
3
A transcriptomic signature predicting septic outcome in patients undergoing autologous stem cell transplantation.
PMID: 29885947
Exp Hematol · 2018
0.50
4
Genome-wide CRISPR screening identifies the pivotal role of ANKRD42 in colorectal cancer metastasis through EMT regulation.
PMID: 38822625
IUBMB Life · 2024
0.25